21 months ago • updated 11 months ago
shepherl
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24 months ago • updated 22 months ago
shepherl
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written 6.0 years ago by
shepherl
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2.5 years ago • updated 2.4 years ago
shepherl
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2.9 years ago
pgauthi1
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3.0 years ago • updated 2.5 years ago
shepherl
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5
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3.5 years ago • updated 3.0 years ago
shepherl
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4.3 years ago • updated 3.9 years ago
shepherl
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3
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0
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1.2k
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5.1 years ago
shepherl
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5.2 years ago
shepherl
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5.4 years ago
shepherl
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5.5 years ago • updated 5.4 years ago
shepherl
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5.6 years ago • updated 5.5 years ago
shepherl
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5.7 years ago • updated 5.6 years ago
shepherl
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5.8 years ago
shepherl
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5.9 years ago
shepherl
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Recent ...
Replies
Comment: DESeq2 - human data, weird results, troubleshooting
by
bd2000
▴
30
I didn't include all of my code the post would be too long. Here's a link to my GitHub if anyone would like to see the full code:
[Full Rst…
Answer: DESeq: Gene is not flagged as differentially expressed despite count data showin
by
James W. MacDonald
68k
The simple answer is that the within-group variability is much higher for the first gene as compared to the second. The Wald statistic is j…
Comment: DESeq: Gene is not flagged as differentially expressed despite count data showin
by
ATpoint
★
4.8k
> since there doesn't seem to be as much count variability,
No? Your CD45 samples range on normalized scale from 2 to 3255. That's 3 orde…
Comment: Ensembl site unresponsive via biomaRt
by
darylruiz6545
•
0
Thank you so much for sharing the link.
Comment: compute_fasta_digest does not match Salmon index hash
by
Alex
•
0
I use the `fastaDigest` tool from [COMBINE-lab/fastaDigest](https://github.com/COMBINE-lab/FastaDigest/), which has the function `compute_f…
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