Showing : ComplexHeatmap • reset
0
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3
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548
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Its possible to remove annotation names using anno_simple in ComplexHeatmap
ComplexHeatmap
updated 3 months ago by ▴ 10 • written 3 months ago by • 0
1
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5
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1.4k
views
ComplexHeatmap - alter legend position
ComplexHeatmap
6 months ago Lucy ▴ 60
2
votes
3
replies
985
views
ComplexHeatmap: add pch to rowAnnotation when the input is a data frame with variable number of continuous columns
ComplexHeatmap
9 months ago daniel.carbajo • 0
2
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2
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755
views
ComplexHeatmap: change the names of a HeatmapAnnotation object
ComplexHeatmap
9 months ago daniel.carbajo • 0
2
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2
replies
856
views
ComplexHeatmap crashing R session
ComplexHeatmap
12 months ago Felipe • 0
2
votes
3
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1.6k
views
How can I draw a barplot of complexheatmap according 'Tumor Type'
heatma heatmaps ComplexHeatmap
updated 2.0 years ago by ▴ 40 • written 2.0 years ago by ▴ 10
3
votes
4
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4.6k
views
ComplexHeatmap - Default distance and hierarchical clustering methods
ComplexHeatmap Complex
updated 2.0 years ago by ▴ 40 • written 2.0 years ago by • 0
2
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5
replies
2.2k
views
ComplexHeatmap - z-score color coding failed
heatmaps ComplexHeatmap
2.1 years ago Katharina • 0
0
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1
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2.1k
views
Complex Heatmap - correlation matrix - how to have exact same annotation with same colors for rows and columns?
R heatmaps ComplexHeatmap Heatma
updated 2.4 years ago by ▴ 290 • written 2.4 years ago by • 0
0
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0
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1.3k
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Boxplot annotation per cluster and column using ComplexHeatmap
ComplexHeatmap
2.5 years ago gdeniz • 0
2
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2
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3.3k
views
ComplexHeatmap: Change font size of annotation axis values
ComplexHeatmap
updated 18 months ago by • 0 • written 2.6 years ago by ▴ 10
3
votes
3
replies
4.8k
views
ComplexHeatmap install error
ComplexHeatmap
updated 2.6 years ago by 67k • written 2.6 years ago by ▴ 10
2
votes
3
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3.4k
views
Complexheatmap row-names not showing up
ComplexHeatmap
2.7 years ago chm • 0
1
vote
1
reply
2.8k
views
ComplexHeatmap: Not able to change the annotations size of the heatmap
ComplexHeatmap Anno Annotation
updated 3.4 years ago by ▴ 290 • written 3.4 years ago by ▴ 10
1
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0
replies
1.3k
views
ComplexHeatmap: Swapping between left_annotation and right_annotation results in a blank space
anno_block ComplexHeatmap left_annotation right_annotation
3.6 years ago glich • 0
2
votes
5
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4.6k
views
News: New in DiffBind 3.2: dba.plotProfile() - Peak profiles and profile heatmaps
profileplyr ATACSeq DiffBind ComplexHeatmap ChIPSeq
updated 2.1 years ago by • 0 • written 3.7 years ago by ★ 5.2k
3
votes
2
replies
2.6k
views
Complex Heatmap shows just one color
Heatmap ComplexHeatmap colorRamp
3.8 years ago Assa Yeroslaviz ★ 1.5k
0
votes
1
reply
3.5k
views
ComplexHeatmap: setting column_order changes plotted values
ComplexHeatmap
3.9 years ago vanbelj ▴ 30
2
votes
4
replies
6.6k
views
Complexheatmap Installation Issue
ComplexHeatmap
4.1 years ago legro.melanie • 0
0
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0
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863
views
How to show rownames in densityheatmaps
ComplexHeatmap
4.2 years ago adR ▴ 40
0
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2
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1.5k
views
K Means Clustering Two Matrices for ComplexHeatmap
complexheatmap R
4.4 years ago pthom010 • 0
0
votes
2
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12k
views
ComplexHeatmap - how to change the position of the legend of rowAnnotation
ComplexHeatmap
updated 4.6 years ago by ▴ 290 • written 4.6 years ago by • 0
1
vote
6
replies
12k
views
Change fontsize/remove name of annotation ComplexHeatmap package
r rnaseq complexHeatmap annotation
updated 4.6 years ago by ▴ 290 • written 4.6 years ago by ▴ 10
0
votes
1
reply
1.8k
views
ComplexHeatmap's UpSet plots: how to convert a binary matrix into a list of sets
ComplexHeatmap UpSet
4.7 years ago moldach ▴ 20
3
votes
2
replies
2.8k
views
Clustering differentially expressed genes in response to multiple treatments (using edgeR)
edger complexheatmap R clustering
updated 4.8 years ago by 52k • written 4.8 years ago by • 0
0
votes
6
replies
5.4k
views
Error: node stack overflow when trying to plot large dataset using Complexheatmap
Complexheatmap
updated 5.4 years ago by ▴ 290 • written 5.4 years ago by ▴ 110
3
votes
7
replies
3.8k
views
Handle missing values in the z-score matrix while plotting heatmap in the ComplexHeatmap
matrix heatmap ComplexHeatmap missing values R
updated 5.4 years ago by ▴ 290 • written 5.4 years ago by ▴ 10
3
votes
2
replies
7.9k
views
ComplexHeatmap removes row labels if annotation is added
annotation show_row_names complexheatmap
5.5 years ago alexw858 • 0
0
votes
1
reply
1.0k
views
ComplexHeatmap : can't find the arguments inherited from the previous version
ComplexHeatmap
updated 5.7 years ago by ▴ 290 • written 5.7 years ago by ▴ 20
4
votes
3
replies
3.6k
views
Align legends to each heatmap in a ComplexHeatmap with 2 heatmaps
complexheatmap r
updated 5.7 years ago by ▴ 290 • written 5.7 years ago by ▴ 220
0
votes
1
reply
3.0k
views
ComplexHeatmap package will not display heatmaps
ComplexHeatmap software error
updated 5.8 years ago by 67k • written 5.8 years ago by • 0
2
votes
1
reply
4.7k
views
Make UpSet function display numbers above the bars
ComplexHeatmap
updated 5.9 years ago by ▴ 290 • written 5.9 years ago by ▴ 40
0
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1
reply
1.5k
views
Error with ComplexHeatmap. Showing only part of image.
Complexheatmap
6.0 years ago Goku • 0
0
votes
2
replies
1.8k
views
ComplexHeatmap column dendrogram
complexheatmap
updated 6.9 years ago by ▴ 200 • written 6.9 years ago by 67k
6
votes
12
replies
13k
views
Combining ComplexHeatmap with other plot types
complexheatmap ggplot2
updated 7.2 years ago by ▴ 290 • written 7.2 years ago by ▴ 10
1
vote
5
replies
9.8k
views
How to add both row and column labels to Complexheatmap
complexheatmap labels
7.4 years ago dilawerkh4 • 0
0
votes
0
replies
1.8k
views
Problem with heatmap by ComplexHeatmap
complexheatmap Rstudio NOISeq
7.4 years ago Luiz • 0
0
votes
1
reply
2.6k
views
about using the names of the rows and columns in ComplexHeatmap
complexheatmap
7.4 years ago Bogdan ▴ 670
3
votes
2
replies
5.1k
views
Automatic color assignment for annotations on ComplexHeatmap
complexheatmap
7.4 years ago CodeAway ▴ 70
0
votes
0
replies
1.5k
views
Changing row height in ComplexHeatmap
complexheatmap
updated 7.4 years ago by 52k • written 7.4 years ago by • 0
2
votes
3
replies
2.7k
views
about MAFTOOLS and ComplexHeatmap
complexheatmap maftools
updated 7.5 years ago by ▴ 90 • written 7.5 years ago by ▴ 670
0
votes
2
replies
2.0k
views
Extracting subclusters from original data
complexheatmap metabolomics
updated 7.5 years ago by ▴ 130 • written 7.5 years ago by • 0
1
vote
2
replies
2.7k
views
legend with gradient in ComplexHeatmap
complexheatmap
7.6 years ago AR3513 • 0
2
votes
2
replies
1.6k
views
about reshaping a data frame
maftools complexheatmap
updated 7.6 years ago by ▴ 110 • written 7.6 years ago by ▴ 670
0
votes
1
reply
1.8k
views
Oncoprint function in ComplexHeatmap
complexheatmap
7.7 years ago Bogdan ▴ 670
0
votes
5
replies
2.5k
views
Problem trying to decorate a heatmap inside a function
complexheatmap
7.8 years ago AR3513 • 0
0
votes
1
reply
1.3k
views
Error in Heatmap...
complexheatmap
7.9 years ago baranikumar22 • 0
8
votes
1
reply
9.9k
views
extracting the genes associated with the clusters
heatmap.2 pheatmap complexheatmap heatplus
updated 7.9 years ago by ▴ 690 • written 7.9 years ago by ▴ 670
0
votes
1
reply
1.5k
views
Drawing a HeatMapList while retaining the original row order of each heat map
complexheatmap
updated 7.9 years ago by ★ 13k • written 7.9 years ago by ▴ 150
1
vote
2
replies
2.2k
views
Error when using multiple heatmaps in ComplexHeatmaps
ComplexHeatmap bug
8.0 years ago brt381 • 0
50 results • Page 1 of 1
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Comment: displaying the differential expression with deseq2 over 4X2 samples with the in by Martijn • 0
thanks James, but if I do pairwise analyses per subject, I get the impression that I only get the intercepts per gene. Do you mean regardin…
Comment: plyranges: find exact GRanges match keeping metadata columns by alexis.weinreb • 0
Thank you, this does clarify the available options.
Answer: displaying the differential expression with deseq2 over 4X2 samples with the in by James W. MacDonald 67k
If you have paired data you should block on subject, which is algebraically the same as fitting a model on the difference between treated a…
Answer: How to compare expression levels of genes between scRNAseq and bulkRNAseq? by jodan • 0
Your approach sounds solid! You might also consider plotting a scatter plot comparing log2 fold changes from both datasets to identify gene…
Answer: Unused arguments error without used arguments in GSVA? by jodan • 0
It looks like the ssgseaParam function might not be passing the correct parameters to GSVA::gsva(). The error suggests that minSize and max…
Votes
Answer: Find exact GRanges match keeping metadata columns
Answer: Find exact GRanges match keeping metadata columns
Answer: Unused arguments error without used arguments in GSVA?
Answer: Unused arguments error without used arguments in GSVA?
Answer: Unused arguments error without used arguments in GSVA?
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