Bioconductor ChIPSeqData

Showing : ChIPSeqData • reset

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219

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ChIPSeqData genomes ChIPSeq

5 months ago user_bioinfo • 0

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360

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ChIPSeqData interact GenomicRanges HiC

8 months ago user_bioinfo • 0

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375

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DiffBind ChIPSeqData

11 months ago Dinesh • 0

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700

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DiffBind ChIPSeqData DESeq2

updated 11 months ago by Michael Love 43k • written 11 months ago by marcusn ▴ 10

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4.2k

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Genome bwamem ChIPSeqData index

updated 2.2 years ago by ATpoint ★ 4.8k • written 2.2 years ago by Maka • 0

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1.2k

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ChipSeq ChIPSeqData chipseqDB

2.4 years ago stacy.genovese • 0

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1.5k

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GeneExpression ChIPSeqData

updated 2.6 years ago by James W. MacDonald 68k • written 2.6 years ago by michela ▴ 20

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2.9k

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DiffBind ChIPSeqData

updated 2.8 years ago by millerh1 ▴ 10 • written 3.4 years ago by sfpacman • 0

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755

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ChIPSeqData

3.4 years ago tom.dean • 0

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2.5k

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ChIPseeker ChIPSeqData

updated 4.4 years ago by James W. MacDonald 68k • written 4.4 years ago by Morris ▴ 10

10 results • Page 1 of 1

Recent ...

Replies

Answer: Help using reduceSimMatrix with a custom annotation by sergisayolspuig ▴ 80

Hi there, `reduceSimMatrix()` expects a "GOALL" keytype in the OrgDb object when called with `children=TRUE` (which is the default for thi…

Answer: Analyzing TnSeq data with DESeq2 by cold.wolverine.arku • 0

That's a great use case of DESeq2! Even though it's not specifically tailored for TnSeq data, your approach to normalize and run explorator…

Comment: RNA Seq using Lrt by Rob • 0

So if I have understood what you have said : If i want to see if Day (time) has an effect / is being tested - then the reduced model should…

Comment: How to convert transcript counts to gene counts in R? by ben • 0

Simply summing transcripts by gene is sufficient for use with DESeq2. [sprunki clicker][1] [1]: https://sprunkiclicker.com/

Answer: EuroBioC2024 abstract submission is open! by Ali • 0

[Promo products][1] are a smart way to boost visibility, especially with exciting updates like *News: EuroBioC2024 abstract submission is o…

Votes

A: Unbalanced experiment with multiple samples from each patient.

A: Understanding contrasts limma

Answer: ROAST for small sets

A: conceptual question about FDR, FDR adjusted p-value and q-value

Awards • All

Popular Question to sergisayolspuig ▴ 80

Popular Question to richardallenfriedmanbrooklyn ▴ 30

Scholar to Gordon Smyth 52k