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Bioc-devel
•
reset
1
vote
2
replies
1.5k
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Segmentation Fault with development versions of R, Bioconductor, and DropletUtils when processing output of CellRanger 3.0.2
DropletUtils
Bioc-devel
5.8 years ago
Matthew Thornton
▴ 380
1
vote
5
replies
1.4k
views
[DEVELOPMENT] Trying to use development version of Bioconductor, needs R 3.6?...
developers
bioc-devel
6.2 years ago
Casper van Mourik
• 0
0
votes
2
replies
1.5k
views
Circular dependencies between data and software packages: how best to avoid
developers
bioc-devel
package development
circular dependencies
updated 6.3 years ago by
shepherl
4.1k • written 6.3 years ago by
Tim Triche
★ 4.2k
3
votes
1
reply
2.4k
views
News:
Latin American BioC Developers Workshop 2018
bioconductor
developers
bioc-devel
News
6.8 years ago
Alejandro Reyes
★ 1.9k
6
votes
3
replies
3.0k
views
How to solve "WARNING: Add non-empty \value" with roxygen tags
bioccheck
roxygen2
warning
bioc-devel
package development
updated 7.2 years ago by
Lluís Revilla Sancho
▴ 760 • written 7.2 years ago by
Paul Brennan
▴ 10
0
votes
0
replies
2.5k
views
Tutorial:
Using Subversion to update /devel branch of Bioconductor package
subversion
bioc-devel
package development
usedevel
Tutorial
7.5 years ago
Bohdan Khomtchouk
▴ 10
3
votes
2
replies
1.3k
views
Changing lead developer for existing package
developers
bioc-devel
updated 7.8 years ago by
Martin Morgan
25k • written 7.8 years ago by
mlbendall
• 0
2
votes
8
replies
4.1k
views
Unable to load/install rtracklayer (v1.33.2) on OS X (possibly SSL-related?)
rtracklayer
bioc-devel
ssl
openssl
updated 8.7 years ago by
Michael Lawrence
★ 11k • written 8.7 years ago by
Peter Hickey
▴ 750
1
vote
3
replies
1.9k
views
Are there any bioconductor github mirrors for data packages?
software
bioc-devel
developers
R
updated 9.2 years ago by
Dan Tenenbaum
★ 8.2k • written 9.2 years ago by
MarcinKosiński
• 0
3
votes
6
replies
2.5k
views
Bioconductor Docker Development container
docker
bioc-devel
updated 9.7 years ago by
Dan Tenenbaum
★ 8.2k • written 9.7 years ago by
Nathan Sheffield
▴ 10
5
votes
3
replies
1.8k
views
BiocCheck: REQUIRED: vignette sources in vignettes/ directory (for custom vignettebuilder)
package
bioconductor
bioc-devel
developers
9.7 years ago
flying-sheep
▴ 10
0
votes
2
replies
2.4k
views
Error reading vcf converted from bed file
readvcf
plink
file conversion
bed
bioc-devel
9.9 years ago
mjsduncan
• 0
0
votes
1
reply
2.2k
views
installation of GenomicRanges package in Rdevel fails
installation
bioc-devel
updated 10.3 years ago by
Martin Morgan
25k • written 10.3 years ago by
Tiphaine Martin
▴ 40
1
vote
1
reply
1.9k
views
Using hash packages with package:rtracklayer, GenomicRanges, Gviz, IRanges, biomaRt conflict
software error
bioc-devel
updated 10.3 years ago by
Martin Morgan
25k • written 10.3 years ago by
Tiphaine Martin
▴ 40
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Comment: Sample-specific methylation values using QSEA
by
User3088
• 0
Thanks Simon. I got the sample-specific methylation values by using '**samples=getSampleNames**' ``` result=makeTable(qs=prad_QSEAset, glm=…
Comment: input for singR function
by
iamin053
• 0
Hi Paria, I'm wondering if you were able to get an answer on this please. I would greatly appreciate any comments!
Comment: build samplesheet and plot profile
by
yf
• 0
![enter image description here][1] [1]: /media/images/8ea93bd0-bc90-443d-a332-4701f54a
Answer: I am having issues with bowtie2_build
by
James W. MacDonald
67k
Is proof.fa an actual FASTA file? Have you tried using the demo data that comes with the package? See the [vignette under Build Bowtie Inde…
Answer: DEG analysis across multiple timepoints, treatments and tissues
by
Michael Love
43k
Yes, if you think the entire time course can be modified by tissue effects then you would include another set of interaction terms. I re…
Votes
Unused arguments error without used arguments in GSVA?
Answer: Is it always preferable to recount library sizes of DGEList object in edgeR afte
A: Doubt about the "zero expression" genes or genes with no reads at all in the co
Answer: Unable to install nloptr
Answer: ensembldb for Homo Sapiens organism containing superfluous SYMBOL genes?
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