Showing : Basel • reset
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Job: Postdoctoral Position in Bioinformatics to study Gene Regulatory Networks (University of Basel, Basel, Switzerland)
PostDoc JobPosting Basel Switzerland
2.9 years ago Robert Ivanek ▴ 750
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Job: Bioinformatician in Core Facility (100%)
JobPosting Job Switzerland Basel
3.7 years ago Robert Ivanek ▴ 750
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Job: Computational biology of cancer (Postdoc Position)
JobPosting Basel Switzerland
3.8 years ago Robert Ivanek ▴ 750
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Job: Data Scientist Proteomics (100%), Biozentrum, University of Basel, Switzerland
Switzerland JobPosting Basel Proteomics
4.0 years ago Robert Ivanek ▴ 750
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Job: Bioinformatician in Experimental Cancer Research (80-100%)
Switzerland Bioconductor Basel job
4.0 years ago Robert Ivanek ▴ 750
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Job: Postdoctoral Fellow in Genomics (University of Basel, Switzerland)
PostDoc Basel Switzerland Job
5.6 years ago Robert Ivanek ▴ 750
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Job: Postdoctoral Position: Posttranscriptional gene regulation in T cells (analysis of RNAseq, metabolomics)
Basel switzerland RNAseq metabolomics Job
6.6 years ago Robert Ivanek ▴ 750
7 results • Page 1 of 1
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Answer: Combining RNAseq and microarray data using edgeR/limma-voom by Gordon Smyth 51k
I agree with James, although I tend to combine analyses using geneset tests rather than by meta analysis tools like GeneMeta. > My questio…
Comment: Adjusted p-values become NA when sub-setting samples by txema.heredia • 0
Thanks! I've been looking into DESeq2's code and, indeed, I get matching results when running manually the code inherited from the `genefi…
Answer: DESeq2 interaction between cancer cells and microenvironment cells by Michael Love 42k
I don't really know what you mean by "come from the contamination". You can look at the main effects and the interaction, but I don't know …
Comment: incomplete official symbol mitochondrial genes in org.Hs.eg.db? by Fahd • 0
Thanks for looking into this. This issue results in the incorrect usage of multiple ORA software including EnrichR.
Comment: incomplete official symbol mitochondrial genes in org.Hs.eg.db? by Guido Hooiveld ★ 4.1k
Yes, I understand the implications of replacing the `OrgDb` packages in release. Maybe an upload to the annotationHub or GitHub could be an…
Votes
A: p.adjust BH generates duplicate values
Answer: Adjusted p-values become NA when sub-setting samples
Comment: Suggestion for FGSEA and GSEA creation for C57BL/6J Mice
Answer: Consistent Decimals In Data After Antibody Array Background Correction Using Lim
A: How does edgeR cpm function calculate log(CPM) values?
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Supporter to Paul Harrison ▴ 100
Popular Question to Mikhail Dozmorov ▴ 30
Popular Question to Gordon Smyth 51k
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