Showing : Aspli • reset
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Error in xj[i] : invalid subscript type 'list' when running jDUreport on Aspli
ASpli
updated 6 months ago by 67k • written 6 months ago by • 0
0
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0
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316
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I am trying to detect alternative splicing.
ASpli
8 months ago Sebashish • 0
0
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0
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580
views
Error in set(x, j = name, value = value) : Supplied 52 items to be assigned to 55 items of column 'locus'. If you wish to 'recycle' the RHS please…
ASpli
10 months ago vipul14 • 0
5
votes
6
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1.3k
views
ASpli checks fail on Linux due to missing dependency to statmod
ASpli
updated 17 months ago by 52k • written 17 months ago by ▴ 10
0
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1
reply
915
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Splicing analysis with ASpli package gives an error when I use binGenome function.
S4Vectors Aspli
updated 22 months ago by • 0 • written 23 months ago by • 0
0
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3
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4.5k
views
ASpli: Error in h(simpleError(msg, call)) : error in evaluating the argument 'x' in selecting a method for function 'sort': 'start' or 'end' canno…
ASpli
updated 15 months ago by • 0 • written 2.2 years ago by • 0
0
votes
0
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800
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ASpli package gives an error in jCounts function and suggest a parameter change in granges()
ASpli alterna AlternativeSplicing
2.9 years ago hamza_karakurt ▴ 60
6
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10
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2.0k
views
ASpli: jCounts() Error in av[at] <- a[at] : NAs are not allowed in subscripted assignments
ASpli
updated 3.3 years ago by • 0 • written 3.6 years ago by ▴ 20
0
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1
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1.9k
views
ASpli: Error in h(simpleError(msg, call))
ASpli
updated 2.4 years ago by • 0 • written 3.4 years ago by • 0
1
vote
3
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1.3k
views
ASpli error message
ASpli
updated 2.9 years ago by ▴ 60 • written 3.7 years ago by ▴ 50
1
vote
11
replies
2.3k
views
Aspli: error with gbCounts
Aspli ASpli
3.8 years ago • updated 3.7 years ago jbono ▴ 10
0
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1
reply
958
views
ASpli package function plotGenomicRegions fails in windows
ASpli plotGenomicRegions
updated 4.4 years ago by ▴ 50 • written 5.4 years ago by • 0
0
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1
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764
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function plotgenomicregions does not appear in the aspli package installed in windows
software error aspli plotgenomicregions windows
4.7 years ago joanmarquez21 • 0
3
votes
2
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1.2k
views
ASpli readCounts never ends!
aspli readCounts rna-seq alternative splicing AS
5.9 years ago fernandalpcosta ▴ 10
0
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0
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1.0k
views
ASpli AsDiscover error
R alternative splicing ASpli AsDiscover
6.0 years ago abdul rawoof ▴ 60
0
votes
0
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1.1k
views
ASpli Package: Problem with readCounts() function, no Junctions analysed.
rnaseq alternative splicing ASpli
6.1 years ago nicolas.guyon2 • 0
0
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0
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965
views
ASPLI (RNAseq AS) R package error
rnaseq ASPLI
6.5 years ago dina.hesham139 • 0
0
votes
0
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1.2k
views
Running ASpli on R results in "Error: vector memory exhausted (limit reached?)"
aspli rstudio
6.6 years ago arphatak • 0
0
votes
1
reply
1.1k
views
Splicing analysis with ASpli
ASpli
updated 6.8 years ago by ★ 1.5k • written 6.8 years ago by ▴ 30
2
votes
2
replies
1.6k
views
ASpli ERROR during the counting step
ASpli rnaseq
updated 6.8 years ago by ▴ 10 • written 7.1 years ago by ▴ 10
20 results • Page 1 of 1
Recent ...
Replies
Comment: ChAMP.DMR error - Error in makeGenomicRatioSetFromMatrix by O'Brien • 0
Consult the ChAMP.DMR documentation for more information on supported array types and expected data formats: https://bioconductor.org/packa…
Answer: combining raw counts and estimated counts by O'Brien • 0
It is possible to combine raw counts from TCGA and estimated counts from GEO datasets (Kalisto pseudoalignment) while mitigating batch effe…
Comment: Packages don't update, but no error or warning is thrown by neighsanlo • 0
This is useful information.
Comment: Perform gene set enrichment analysis using fgsea on two conditions that don't ha by freemanmclaughlin9969289 • 0
Tools such as Pathway Analysis with Deweighting of Overlapping Genes ([block blast][1]) or Gene Set Enrichment Analysis for Single Cell RNA…
Comment: How to get around the warning message: mzR has been built against a different Rc by Nan • 0
Hello, I was wondering if you were able to resolve this issue? I've recently encountered a similar problem and would like to ask for your a…
Votes
Answer: Can DESeq2's design compensate for sequencing experimental design shortcomings?
Comment: Issues with seqlevelsStyle when making custom txdb objects for genomes/annotatio
C: edgeR and lack of counts ID on CPM matrix
A: DESeq2 Following RSEM
A: importing RSEM data into DESeq2
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