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Created An Answer With At Least 3 Up-Votes
Awarded 2253 times (see all awards). Earned by the
following contributors:
9 years, 5 months ago
The city by the bay
A: limma p-value and adjusted p-value meaning
9 years, 5 months ago
WEHI, Melbourne, Australia
A: Standard error and effect size from Limma
9 years, 5 months ago
United States
A: readGAlignmentPairs slow in problematic region
9 years, 5 months ago
The city by the bay
A: Finding DE genes across any condition with Limma
9 years, 6 months ago
United States
Limma - discrepancy in number of significant genes
9 years, 6 months ago
Australia/Melbourne
A: Use BAM file created from subjunc function (Rsubread package) for feature counts
9 years, 6 months ago
United States
A: Principal component plot of the RNAseq samples and DEseq2 result
9 years, 6 months ago
Germany
Plot ggplot2 and ggbio Images Together
9 years, 6 months ago
The city by the bay
A: Independent filtering with unequal group sizes?
9 years, 6 months ago
United States
Limma - discrepancy in number of significant genes
9 years, 6 months ago
United States
A: WGCNA - Compare module preservation between class
9 years, 6 months ago
United States
DESEq2 comparison with mulitple cell types under 2 conditions
9 years, 6 months ago
WEHI, Melbourne, Australia
voom + removeBatchEffect + gene clustering
9 years, 6 months ago
United States
Limma - discrepancy in number of significant genes
9 years, 6 months ago
United States
Limma - discrepancy in number of significant genes
9 years, 6 months ago
United States
Perform limma on a subset of genes of interest
9 years, 6 months ago
WEHI, Melbourne, Australia
voom + removeBatchEffect + gene clustering
9 years, 6 months ago
United States
Perform limma on a subset of genes of interest
9 years, 6 months ago
United States
A: Standard error and effect size from Limma
9 years, 6 months ago
WEHI, Melbourne, Australia
A: Variance filtering prior to RNA-seq differential expression
9 years, 6 months ago
WEHI, Melbourne, Australia
voom + removeBatchEffect + gene clustering
9 years, 6 months ago
WEHI, Melbourne, Australia
A: Using limma when continuous and categorical confounders are present at the same
9 years, 7 months ago
United States
A: Limma camera function never gives any differentially expressed gene sets
9 years, 7 months ago
Germany/Heidelberg/German Cancer Resear…
A: Non specific filtering prior to differential expression with limma based on vari
9 years, 7 months ago
United States
A: Understanding edgeR coefficients and design
9 years, 7 months ago
United States
Limma - discrepancy in number of significant genes
9 years, 7 months ago
United States
Limma - discrepancy in number of significant genes
9 years, 7 months ago
United States
Does the BAM need to be sorted by name for "summarizeOverlaps" of "GenomicAlignments"
9 years, 7 months ago
Zentrum für Molekularbiologie, Universi…
DEXSeq Usage and Expression Confusion
9 years, 7 months ago
United States
Limma - discrepancy in number of significant genes
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