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following contributors:
9 years, 7 months ago
WEHI, Melbourne, Australia
voom + removeBatchEffect + gene clustering
9 years, 7 months ago
The city by the bay
A: How to make contrast table to combine two conditions/treatments against another
9 years, 7 months ago
WEHI, Melbourne, Australia
Confidence intervals on edgeR logFC
9 years, 7 months ago
WEHI, Melbourne, Australia
A: limma-voom when testing differential expression of a subset of genes.
9 years, 7 months ago
United States
Limma - discrepancy in number of significant genes
9 years, 7 months ago
WEHI, Melbourne, Australia
Confidence intervals on edgeR logFC
9 years, 7 months ago
WEHI, Melbourne, Australia
A: voom + removeBatchEffect + gene clustering
9 years, 7 months ago
United States
Limma - discrepancy in number of significant genes
9 years, 7 months ago
The city by the bay
Obtaining Differentially expressed gene lists at a Fold change and FDR cut-off
9 years, 7 months ago
WEHI, Melbourne, Australia
Confidence intervals on edgeR logFC
9 years, 7 months ago
The city by the bay
A: Limma on Methylation Data - Fold Change Question
9 years, 7 months ago
The city by the bay
Obtaining Differentially expressed gene lists at a Fold change and FDR cut-off
9 years, 7 months ago
United States
DESEq2 comparison with mulitple cell types under 2 conditions
9 years, 7 months ago
United States
Limma - discrepancy in number of significant genes
9 years, 7 months ago
Icahn School of Medicine at Mount Sinai…
EdgeR Multifactorial design with batch effect-trouble with defining contrasts
9 years, 7 months ago
United States
A: EdgeR Multifactorial design with batch effect-trouble with defining contrasts
9 years, 7 months ago
The city by the bay
A: Limma different sample size of groups and adjustment
9 years, 7 months ago
WEHI, Melbourne, Australia
Confidence intervals on edgeR logFC
9 years, 7 months ago
United States
Limma - discrepancy in number of significant genes
9 years, 7 months ago
WEHI, Melbourne, Australia
A: EdgeR: batches and samples over-specify system, how to contrast un-modeled varia
9 years, 7 months ago
United States
A: DESeq2: Compare expression of one group to the mean of others
9 years, 7 months ago
United States
DESEq2 comparison with mulitple cell types under 2 conditions
9 years, 7 months ago
United States
Use R/Bioconductor to match BLAST hits to GO terms?
9 years, 7 months ago
The city by the bay
Obtaining Differentially expressed gene lists at a Fold change and FDR cut-off
9 years, 7 months ago
WEHI, Melbourne, Australia
A: how to explain the figure obtained from edgeR?
9 years, 7 months ago
WEHI, Melbourne, Australia
Removing continuous covariate effects in limma analysis
9 years, 7 months ago
WEHI, Melbourne, Australia
Confidence intervals on edgeR logFC
9 years, 7 months ago
United States
What is the best way to get help on Bioconductor packages?
9 years, 7 months ago
Australia/Melbourne
A: Rsubread::featureCounts extremely slow on some annotations
9 years, 7 months ago
United States
Use R/Bioconductor to match BLAST hits to GO terms?
9 years, 7 months ago
United States
Use R/Bioconductor to match BLAST hits to GO terms?
9 years, 7 months ago
Icahn School of Medicine at Mount Sinai…
A: edgeR (3.10.2) contrast question for experimental factors combined as a group
9 years, 7 months ago
Icahn School of Medicine at Mount Sinai…
edgeR (3.10.2) contrast question for experimental factors combined as a group
9 years, 7 months ago
United States
Use R/Bioconductor to match BLAST hits to GO terms?
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