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following contributors:
7 years, 8 months ago
Icahn School of Medicine at Mount Sinai…
What's the relationship between "design" and "contrasts"?
7 years, 8 months ago
WEHI, Melbourne, Australia
Subsetting ELists and Applying sva to Iterative Differential Gene Expression Tests
7 years, 8 months ago
Barcelona/Universitat Pompeu Fabra
Best method/package for Gene Set Enrichment Analysis in microarrays?
7 years, 8 months ago
Australia/Melbourne
Reads mistakenly being assigned to Unassigned_NoFeatures category when using featureCounts
7 years, 8 months ago
Australia/Melbourne
A: Reads mistakenly being assigned to Unassigned_NoFeatures category when using fea
7 years, 8 months ago
Zentrum für Molekularbiologie, Universi…
Normalization methodology in DESeq/DESeq2 vs edgeR
7 years, 8 months ago
United States
Filtering absent transcripts from Gene ST array
7 years, 8 months ago
United States
A: Filtering absent transcripts from Gene ST array
7 years, 8 months ago
Switzerland
Gvis: Adding colour and transparency to overlaid alignment tracks
7 years, 8 months ago
WEHI, Melbourne, Australia
Subsetting ELists and Applying sva to Iterative Differential Gene Expression Tests
7 years, 8 months ago
WEHI, Melbourne, Australia
A: Subsetting ELists and Applying sva to Iterative Differential Gene Expression Tes
7 years, 8 months ago
United States
Can edgeR TMM normalization be used for other count data?
7 years, 8 months ago
United States
A: Can edgeR TMM normalization be used for other count data?
7 years, 8 months ago
EMBL Heidelberg
biomaRT GO-ID retreival showing different genes than AmiGO
7 years, 8 months ago
Austria
R code for cn.mops -- if a chromosome does not have CNV ?
7 years, 9 months ago
United States
A: Regressing effect of treatment on RNA-seq expected count from rsem.
7 years, 9 months ago
EMBL Heidelberg
biomaRT GO-ID retreival showing different genes than AmiGO
7 years, 9 months ago
WEHI, Melbourne, Australia
limma; Only fit list of certain genes/ filter eSet
7 years, 9 months ago
United States
A: Is the VST implemented in DESeq useful on time-series cell differentiation datas
7 years, 9 months ago
United States
Is the VST implemented in DESeq useful on time-series cell differentiation datasets?
7 years, 9 months ago
United States
A: Changing lead developer for existing package
7 years, 9 months ago
United States
How to check the read length for all the TCGA data samples in GDC?
7 years, 9 months ago
United States
SummarizedExperiment object from GEOquery obtained GSE
7 years, 9 months ago
The city by the bay
A: Correct contrast for testing multi-level interaction effect in limma using combi
7 years, 9 months ago
Italy
Problem running dexseq in parallel using BiocParallel
7 years, 9 months ago
United States
A: Limma: Paired samples, multiple groups: problems understanding contrasts and mod
7 years, 9 months ago
United Kingdom
How did the edgeR authors compute Figure 2 (genewise deviance statistics?)
7 years, 9 months ago
United Kingdom
How did the edgeR authors compute Figure 2 (genewise deviance statistics?)
7 years, 9 months ago
WEHI, Melbourne, Australia
A: threshold to filter lowly expressed genes
7 years, 10 months ago
United States
A: how to transform a list of IRanges into a RangesList instance
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