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following contributors:
6 years, 11 months ago
Mitchell Cancer Institute, Mobile AL, U…
A: Microarray analysis of .adat files to identify degs
6 years, 11 months ago
WEHI, Melbourne, Australia
A: Performing differential gene analysis on RT PCR experimental data
6 years, 11 months ago
EMBL Heidelberg
A: getBM error: The query to the BioMart webservice returned an invalid result
6 years, 11 months ago
Germany
Problem using sva with limma for microarray DE analysis
6 years, 11 months ago
United States
A: DESeq2 batch effect modeling and matrix not full rank
6 years, 11 months ago
The city by the bay
A: Best way to design a contrast matrix for analysis of dataset
6 years, 12 months ago
EMBL Heidelberg
A: Scan error using biomart with version option
7 years ago
United States
A: Should I contrast 2 treatment groups using the control group as reference or dir
7 years ago
Canada
conumee error: query intensities not given for all probes.
7 years ago
United States
A: DESeq2 1.16.1 : Zero count values re-occurrence of issue 56191?
7 years ago
Bioinformatics Laboratory, Academic Med…
A: Limma Voom produces many identical adjusted p-values
7 years ago
United States
A: single-cells RNA-seq analysis by MAST with unbalanced group size
7 years ago
United States
A: log fold change threshold in Deseq2 - using lfcthreshold
7 years, 1 month ago
China/Guangzhou/Southern Medical Univer…
A: Function simplify fails when argument ont is set to "ALL" in enrichGO function i
7 years, 1 month ago
Swedish Museum of Natural History
A: The query to the BioMart webservice returned an invalid result: the number of co
7 years, 1 month ago
The city by the bay
A: Correct annotation of DGEList object from edgeR package regarding an RNA-Seq dat
7 years, 1 month ago
The city by the bay
A: Paired Test - Design Matrix and Contrast Matrix Voom and Limma
7 years, 1 month ago
Australia
A: voomWithQualityWeights: question on min. number of replicates per group + design
7 years, 1 month ago
The city by the bay
A: edgeR: Should there be a normalization step for CRISPR screens? How to deal with
7 years, 1 month ago
The city by the bay
A: How to use limma to do regularization for Ballgown
7 years, 1 month ago
United States
A: DESeq2 batch effect with and without interaction model
7 years, 2 months ago
United States
A: How to set 'strandMode' with summarizeOverlaps()
7 years, 2 months ago
United States
A: DESeq2 biais when genes are missing from the annotation?
7 years, 2 months ago
United States
A: Strong upwards correlation between log fold change and average log expression in
7 years, 2 months ago
United States
A: unlist a exons GRangeslist object and add a gene name column
7 years, 2 months ago
The city by the bay
A: Is there are better way to improve the design via blocking or contrasts while us
7 years, 2 months ago
European Union
A: How to solve "WARNING: Add non-empty \value" with roxygen tags
7 years, 2 months ago
United States
A: Best DEG tool for datasets with FPKM counts?
7 years, 2 months ago
United States
A: Presence of GO annotations for human mitochondrial genes in org.Hs.eg.db?
7 years, 2 months ago
The city by the bay
A: Cannot create SingleCellExperiment object
7 years, 2 months ago
United States
A: featureCounts in-built annotation doesn't match BioMart annotation?
7 years, 2 months ago
United States
A: Normalize to additional variable (brain weight) in DESeq2
7 years, 2 months ago
WEHI, Melbourne, Australia
A: Can I meaningfully interpret a PCA or MDS plot of data with surrogate variable e
7 years, 2 months ago
The city by the bay
A: edgeR effects of design on testing main effects and interactions
7 years, 3 months ago
United States
A: Difference between heatmap using Euclidian distance and Poisson distance
7 years, 3 months ago
United States
A: DESeq2 contrast give different results for same comparison using standard analys
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