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63
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7 days ago neilzhao ▴ 30
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updated 7 days ago by • 0 • written 6.6 years ago by ▴ 30
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updated 7 days ago by ★ 4.1k • written 7 days ago by • 0
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updated 8 days ago by ▴ 10 • written 7.4 years ago by ▴ 190
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501
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updated 9 days ago by • 0 • written 5 months ago by • 0
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10 days ago • updated 9 days ago Chris ▴ 10
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Limma without eBayes, is it indistunguishable from Ordinary Least Square?
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updated 9 days ago by 50k • written 5.6 years ago by ▴ 10
0
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9 days ago nromerov • 0
4
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155
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minfi latest update for EPIC V2 chip
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updated 9 days ago by 65k • written 9 days ago by • 0
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Recovering my account credentials on Bioconductor
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updated 9 days ago by 3.9k • written 9 days ago by • 0
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need help with Diffbind multiple groups
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10 days ago Dinesh • 0
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[Mfuzz] Error in cmeans(exprs(eset)
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updated 10 days ago by • 0 • written 13.1 years ago by ▴ 720
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updated 10 days ago by 42k • written 10 days ago by • 0
4
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2
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Why does GSEA on edgeR results for randomized samples give highly significant p-values?
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14 days ago • updated 10 days ago gene_bioconductor ▴ 10
3
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1
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142
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How to save the DEXSeq results
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updated 10 days ago by 42k • written 10 days ago by • 0
2
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1
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140
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Trim/Filter out-of-bounds GRanges
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updated 10 days ago by 42k • written 10 days ago by ▴ 70
1
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2
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Improving the design matrices vignette in RNAseq123
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24 days ago • updated 10 days ago Lluís Revilla Sancho ▴ 730
2
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package goseq seems to be not available on the latest version of R
goseq
updated 10 days ago by 50k • written 13 days ago by ▴ 20
0
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5
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DNAString: Standard checksum function?
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8.2 years ago • updated 11 days ago Henrik Bengtsson ★ 2.4k
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fgsea significant result
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12 days ago • updated 11 days ago Chris ▴ 10
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184
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Handling multiple differential expression comparisons
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updated 11 days ago by 42k • written 13 days ago by ▴ 10
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updated 11 days ago by ★ 4.1k • written 13 days ago by • 0
0
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updated 12 days ago by ★ 1.4k • written 14 days ago by ▴ 130
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2
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limma Intercept vs No-intercept models completely changing DMR results?
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updated 13 days ago by 50k • written 13 days ago by • 0
0
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0
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Empty table plot using plotGseaTable()
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15 days ago • updated 13 days ago Chris ▴ 10
1
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2
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6 weeks ago • updated 13 days ago Kim • 0
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0
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dba.plotProfile() plotting and interpretation
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13 days ago Henry ▴ 10
0
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2
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16 days ago • updated 13 days ago Aurora • 0
0
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0
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21 days ago • updated 13 days ago glaciya2018 • 0
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2
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15 days ago • updated 14 days ago kcarey • 0
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1
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172
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NEED FOR NESSASORY HELP
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updated 14 days ago by 50k • written 14 days ago by • 0
0
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1
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152
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updated 14 days ago by 50k • written 14 days ago by • 0
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flowStats for CyTOF
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14 days ago tholmes • 0
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2
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DESeq2 v1.35.0
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updated 14 days ago by 42k • written 14 days ago by • 0
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Although I successfully installed the package "simpleaffy'' , I cannot library it. Why?
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updated 14 days ago by 65k • written 2.3 years ago by • 0
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0
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DiffBind: no peaks in DBA object
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14 days ago yvonneh • 0
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0
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How to create consensus peak sets for each group to use in DiffBind?
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14 days ago Ian D. ▴ 70
0
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1
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127
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Job: Postdoctoral Position in Bioinformatics - Mainz, Germany
JobPosting
written 14 days ago by • 0
0
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3
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Differences in differential analysis methods for RNA-Seq
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updated 14 days ago by ★ 4.1k • written 15 days ago by • 0
0
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2
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limma-voom: Calculate the log-fold change in gene expression within a sample
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written 24 days ago by • 0
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Get genomic coordinates of CpGs sites (chromosomes, genomic position)
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16 days ago • updated 15 days ago Yveto • 0
0
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3
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log2FoldChange value is way too different when compared with counts(dds)
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updated 15 days ago by 42k • written 16 days ago by • 0
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News: Bioconductor 3.19 is Released!
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15 days ago shepherl 3.9k
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Why p value inconsistent when using different number of pathway score?
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26 days ago • updated 15 days ago Chris ▴ 10
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DEseq2 coefficient
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11 weeks ago • updated 15 days ago JKim • 0
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Help with error using camera() in limma
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updated 16 days ago by • 0 • written 8.0 years ago by • 0
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Comment: Ensembl plants at annotationHub? by Daniele • 0
Dear Johannes, Would it be possible to create the EnsDb for Triticum aestivum (IWGSC)? Thank you very much, Daniele
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Figured it out with ?eigencorplot, thanks Michael. I was trying to pass 10 PCs when I only had 8, and I was including metadata columns that…
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