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Comment: Comment: glimmaMA() produces blank plot if have annot column named "gene"
2.8 years ago Shian Su ▴ 40
3
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1
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1.0k
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How to use Mus.musculus in a package function without polluting namespace?
annotation
updated 4.3 years ago by 25k • written 4.3 years ago by ▴ 40
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2
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967
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Should GenomicAlignments::mapToAlignments() terminate when no alignments are found for one read?
GenomicAlignments
updated 5.1 years ago by ★ 6.8k • written 5.1 years ago by ▴ 40
4
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6
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2.1k
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How to query a base along an aligned read by genomic position?
GenomicAlignments BAM CIGAR
updated 5.1 years ago by ▴ 740 • written 5.2 years ago by ▴ 40
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1
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2.1k
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Comment: C: How to query a base along an aligned read by genomic position?
5.1 years ago Shian Su ▴ 40
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2.1k
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Comment: C: How to query a base along an aligned read by genomic position?
5.1 years ago Shian Su ▴ 40
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Comment: C: What to do when a bug is found in a BioConductor package (Glimma)
5.3 years ago Shian Su ▴ 40
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0
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983
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Answer: A: Why does the Glimma package require R >= 3.4.0 ?
6.8 years ago Shian Su ▴ 40
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1
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4.3k
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Comment: C: Is it possible to annotated mitochondrial genes with ENSEMBL ids and Homo.sapien
7.1 years ago Shian Su ▴ 40
5
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3
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4.3k
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Is it possible to annotated mitochondrial genes with ENSEMBL ids and Homo.sapiens/Mus.musculus?
homo.sapiens annotationdbi
updated 7.1 years ago by ★ 2.1k • written 7.1 years ago by ▴ 40
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2.6k
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Comment: C: Cannot create SingleCellExperiment object
7.1 years ago Shian Su ▴ 40
3
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3
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2.6k
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Cannot create SingleCellExperiment object
singlecellexperiment
updated 7.1 years ago by ★ 28k • written 7.1 years ago by ▴ 40
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1
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3.0k
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Comment: C: How do you test a contrast in MAST?
7.3 years ago Shian Su ▴ 40
3
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3
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3.0k
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How do you test a contrast in MAST?
MAST single-cell differential gene expression
updated 7.3 years ago by ▴ 270 • written 7.3 years ago by ▴ 40
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0
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2.2k
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Comment: C: Does Rhtslib currently work on Windows?
7.4 years ago Shian Su ▴ 40
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0
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2.2k
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Comment: C: Does Rhtslib currently work on Windows?
7.4 years ago Shian Su ▴ 40
4
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7
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2.2k
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Does Rhtslib currently work on Windows?
Rhtslib htslib package
updated 7.4 years ago by 25k • written 7.4 years ago by ▴ 40
1
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1
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1.2k
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Answer: C: bug in Glimma - anno can't have T/F
8.5 years ago Shian Su ▴ 40
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