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Any recommended workflow for incrementally selecting top ranked genes by using mRMR feature selection?
microarray gene-filtering mRMR parallel-processing bioconductor-package
5.4 years ago • updated 5.3 years ago Jurat Shahidin ▴ 80
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1.2k
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Comment: C: How can I overcome the error of "No residual degrees of freedom in linear model
5.4 years ago Jurat Shahidin ▴ 80
2
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3
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1.2k
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How can I overcome the error of "No residual degrees of freedom in linear model fits"?
limma microarray error
updated 5.4 years ago by ★ 1.5k • written 5.4 years ago by ▴ 80
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2.5k
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Comment: C: Any efficient workaround to identify highly variable genes in Affymetrix microar
5.5 years ago Jurat Shahidin ▴ 80
0
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0
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2.5k
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Comment: C: Any efficient workaround to identify highly variable genes in Affymetrix microar
5.5 years ago Jurat Shahidin ▴ 80
0
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0
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2.5k
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Comment: C: Any efficient workaround to identify highly variable genes in Affymetrix microar
5.5 years ago Jurat Shahidin ▴ 80
0
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1
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2.5k
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Answer: A: Any efficient workaround to identify highly variable genes in Affymetrix microar
5.5 years ago Jurat Shahidin ▴ 80
9
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10
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2.5k
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Any efficient workaround to identify highly variable genes in Affymetrix microarray expression data?
limma microarray genefilter deseq2
5.5 years ago Jurat Shahidin ▴ 80
0
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1
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2.5k
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Comment: C: Any efficient workaround to identify highly variable genes in Affymetrix microar
5.5 years ago Jurat Shahidin ▴ 80
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1
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2.1k
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Comment: C: How to find out the genes that changes in expression by using gene level express
5.5 years ago Jurat Shahidin ▴ 80
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2
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2.1k
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Comment: C: How to find out the genes that changes in expression by using gene level express
5.5 years ago Jurat Shahidin ▴ 80
0
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1
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2.1k
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Comment: C: How to find out the genes that changes in expression by using gene level express
5.5 years ago Jurat Shahidin ▴ 80
6
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8
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2.1k
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How to find out the genes that changes in expression by using gene level expression data matrix?
limma microarray affy edger
5.5 years ago Jurat Shahidin ▴ 80
0
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0
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1.9k
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Comment: C: How to render summary list for `GRangesList` by using `SummarizedExperiment` pac
7.7 years ago Jurat Shahidin ▴ 80
0
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1
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1.9k
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Comment: C: How to render summary list for `GRangesList` by using `SummarizedExperiment` pac
7.7 years ago Jurat Shahidin ▴ 80
2
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4
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1.9k
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How to render summary list for `GRangesList` by using `SummarizedExperiment` package?
r summarizedexperiment grangeslist
7.7 years ago Jurat Shahidin ▴ 80
1
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4
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5.4k
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do.call error "second argument must be a list" with GRanges object [closed]
r error handling
7.8 years ago Jurat Shahidin ▴ 80
0
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0
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5.4k
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Comment: C: do.call error "second argument must be a list" with GRanges object
7.8 years ago Jurat Shahidin ▴ 80
0
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0
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5.4k
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Comment: C: do.call error "second argument must be a list" with GRanges object
7.8 years ago Jurat Shahidin ▴ 80
0
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1
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4.8k
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Comment: C: Any way to proceed duplicate removal for list of GRanges object ?
7.9 years ago Jurat Shahidin ▴ 80
0
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1
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4.8k
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Comment: C: Any way to proceed duplicate removal for list of GRanges object ?
7.9 years ago Jurat Shahidin ▴ 80
0
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1
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4.8k
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Comment: C: Any way to proceed duplicate removal for list of GRanges object ?
7.9 years ago Jurat Shahidin ▴ 80
3
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16
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4.8k
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Any way to proceed duplicate removal for list of GRanges object ?
r grangeslist duplicate
updated 7.9 years ago by 25k • written 7.9 years ago by ▴ 80
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1
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4.8k
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Comment: C: Any way to proceed duplicate removal for list of GRanges object ?
7.9 years ago Jurat Shahidin ▴ 80
0
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1
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4.8k
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Comment: C: Any way to proceed duplicate removal for list of GRanges object ?
7.9 years ago Jurat Shahidin ▴ 80
0
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0
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4.8k
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Comment: C: Any way to proceed duplicate removal for list of GRanges object ?
7.9 years ago Jurat Shahidin ▴ 80
0
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0
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4.8k
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Comment: C: Any way to proceed duplicate removal for list of GRanges object ?
7.9 years ago Jurat Shahidin ▴ 80
0
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0
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1.7k
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Comment: C: Any way to debug unusual vignette error when building package?
7.9 years ago Jurat Shahidin ▴ 80
0
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1
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1.7k
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Comment: C: How to plot benchmark result of R/ Bioconductor package (getting curve or line g
7.9 years ago Jurat Shahidin ▴ 80
0
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1
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1.7k
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Comment: C: How to plot benchmark result of R/ Bioconductor package (getting curve or line g
7.9 years ago Jurat Shahidin ▴ 80
0
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5
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1.7k
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How to plot benchmark result of R/ Bioconductor package (getting curve or line graph)?
r benchmark performance ggplot2
7.9 years ago Jurat Shahidin ▴ 80
1
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3
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1.7k
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Any way to debug unusual vignette error when building package?
r compilation error error handling data.table
7.9 years ago Jurat Shahidin ▴ 80
0
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2
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1.8k
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How to take sample peak from each chromosome in peak bed files ?
r chipseq encode peak
8.0 years ago Jurat Shahidin ▴ 80
0
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0
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1.8k
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Comment: C: How can I get rather small example data from Encode sample's Chip-seq peak file
8.0 years ago Jurat Shahidin ▴ 80
1
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0
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1.3k
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Answer: A: How to conditionally combine IntegerList in the DataFrame more elegantly?
8.1 years ago Jurat Shahidin ▴ 80
5
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2
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1.5k
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seeking idea for proper output representation for multiple GRanges overlapping
r grangeslist biocparallel findoverlaps
8.4 years ago • updated 8.1 years ago Jurat Shahidin ▴ 80
5
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3
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1.4k
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How to avoid repeated overlap pair for GRanges object in grid?
r genomicranges
8.3 years ago • updated 8.1 years ago Jurat Shahidin ▴ 80
0
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0
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1.1k
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Comment: C: Any way to speed up splitting relatively big GRanges objects by given threshold
8.1 years ago Jurat Shahidin ▴ 80
2
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2
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1.1k
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Any way to speed up splitting relatively big GRanges objects by given threshold ?
r granges split performance
updated 8.1 years ago by ★ 11k • written 8.1 years ago by ▴ 80
0
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1
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18k
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Comment: C: Any quick solution for fixing error : "$ operator is invalid for atomic vectors"
8.1 years ago Jurat Shahidin ▴ 80
3
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5
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18k
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Any quick solution for fixing error : "$ operator is invalid for atomic vectors" ?
r granges dplyr error handling
updated 8.1 years ago by ★ 6.6k • written 8.1 years ago by ▴ 80
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0
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18k
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Comment: C: Any quick solution for fixing error : "$ operator is invalid for atomic vectors"
8.1 years ago Jurat Shahidin ▴ 80
2
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4
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1.4k
views
How to remove duplicated overlap hit index in IntegerList efficiently [solved] ?
r iranges integerlist
8.2 years ago Jurat Shahidin ▴ 80
0
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1
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1.7k
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Comment: C: Any way to combine two GRangesList easily ?
8.2 years ago Jurat Shahidin ▴ 80
2
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4
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1.7k
views
Any way to combine two GRangesList easily ?
genomicranges grangeslist r
updated 8.2 years ago by ★ 11k • written 8.2 years ago by ▴ 80
0
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0
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1.7k
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Answer: A: Any way to combine two GRangesList easily ?
8.2 years ago Jurat Shahidin ▴ 80
0
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0
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1.5k
views
Comment: C: Any way to detach or simplify nested GRangesList ?
8.2 years ago Jurat Shahidin ▴ 80
0
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1
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1.5k
views
Comment: C: Any way to detach or simplify nested GRangesList ?
8.2 years ago Jurat Shahidin ▴ 80
3
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4
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1.5k
views
Any way to detach or simplify nested GRangesList ?
grangeslist filtering r
8.2 years ago Jurat Shahidin ▴ 80
2
votes
1
reply
1.1k
views
Few doubt about new package submission
bioconductor submit package
updated 8.2 years ago by 25k • written 8.2 years ago by ▴ 80
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