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Comment: C: how to install package of "rnaseqGene" for R (ver: 3.5.2) for windows
6.2 years ago mheydarpour ▴ 10
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how to install package of "rnaseqGene" for R (ver: 3.5.2) for windows
rnaseqGene
updated 6.2 years ago by 68k • written 6.2 years ago by ▴ 10
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mean and SD in output of Limma for differential-gene-expression
limma mean sd
updated 7.1 years ago by ★ 28k • written 7.1 years ago by ▴ 10
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Comment: C: Remove batch effect using individuals as random in the model in Limma
7.4 years ago mheydarpour ▴ 10
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Comment: C: Remove batch effect using individuals as random in the model in Limma
7.4 years ago mheydarpour ▴ 10
1
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4
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3.4k
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Remove batch effect using individuals as random in the model in Limma
batch effect Coeficents non estimable block random effects limma design matrix
updated 7.4 years ago by ★ 28k • written 7.4 years ago by ▴ 10
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Comment: C: handling missing data (NA) for methylaion analysis in Limma
7.5 years ago mheydarpour ▴ 10
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Comment: C: handling missing data (NA) for methylaion analysis in Limma
7.5 years ago mheydarpour ▴ 10
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Comment: C: handling missing data (NA) for methylaion analysis in Limma
7.5 years ago mheydarpour ▴ 10
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Comment: C: handling missing data (NA) for methylaion analysis in Limma
7.5 years ago mheydarpour ▴ 10
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Comment: C: handling missing data (NA) for methylaion analysis in Limma
7.5 years ago mheydarpour ▴ 10
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13
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3.0k
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handling missing data (NA) for methylaion analysis in Limma
limma missing data methylation normalization
updated 7.5 years ago by ★ 28k • written 7.5 years ago by ▴ 10
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Comment: C: handling missing data (NA) for methylaion analysis in Limma
7.5 years ago mheydarpour ▴ 10
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Comment: C: remove batch effect and adjusted model for 4 covariates in Limma
8.1 years ago mheydarpour ▴ 10
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Comment: C: remove batch effect and adjusted model for 4 covariates in Limma
8.1 years ago mheydarpour ▴ 10
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Answer: A: remove batch effect and adjusted model for 4 covariates in Limma
8.1 years ago mheydarpour ▴ 10
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19
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4.5k
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remove batch effect and adjusted model for 4 covariates in Limma
limma batch effect covariates contrast differential gene expression
8.1 years ago mheydarpour ▴ 10
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Comment: C: remove batch effect and adjusted model for 4 covariates in Limma
8.1 years ago mheydarpour ▴ 10
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Comment: C: remove batch effect and adjusted model for 4 covariates in Limma
8.1 years ago mheydarpour ▴ 10
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4.5k
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Comment: C: remove batch effect and adjusted model for 4 covariates in Limma
8.1 years ago mheydarpour ▴ 10
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4.5k
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Comment: C: remove batch effect and adjusted model for 4 covariates in Limma
8.1 years ago mheydarpour ▴ 10
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4.5k
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Comment: C: remove batch effect and adjusted model for 4 covariates in Limma
8.1 years ago mheydarpour ▴ 10
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4.5k
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Comment: C: remove batch effect and adjusted model for 4 covariates in Limma
8.1 years ago mheydarpour ▴ 10
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Comment: C: Insert PCA in design model for adjusting
8.5 years ago mheydarpour ▴ 10
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1.3k
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Insert PCA in design model for adjusting
PCA
updated 8.5 years ago by 68k • written 8.5 years ago by ▴ 10
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Answer: A: create design matrix when 2 groups of gene-expression data
9.0 years ago mheydarpour ▴ 10
2
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30
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4.9k
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create design matrix when 2 groups of gene-expression data
limma
9.3 years ago • updated 9.0 years ago mheydarpour ▴ 10
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Comment: C: create design matrix when 2 groups of gene-expression data
9.0 years ago mheydarpour ▴ 10
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Comment: C: volcano plot in Limma
9.0 years ago mheydarpour ▴ 10
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2
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volcano plot in Limma
limma volcanoplot
updated 9.0 years ago by ★ 28k • written 9.0 years ago by ▴ 10
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Comment: C: create design matrix when 2 groups of gene-expression data
9.2 years ago mheydarpour ▴ 10
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4.9k
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Comment: C: create design matrix when 2 groups of gene-expression data
9.2 years ago mheydarpour ▴ 10
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4.9k
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Answer: A: create design matrix when 2 groups of gene-expression data
9.3 years ago • updated 9.2 years ago mheydarpour ▴ 10
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Comment: C: create design matrix when 2 groups of gene-expression data
9.2 years ago mheydarpour ▴ 10
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4.9k
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Comment: C: create design matrix when 2 groups of gene-expression data
9.2 years ago mheydarpour ▴ 10
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4.9k
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Comment: C: create design matrix when 2 groups of gene-expression data
9.2 years ago mheydarpour ▴ 10
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1
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4.9k
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Comment: C: create design matrix when 2 groups of gene-expression data
9.2 years ago mheydarpour ▴ 10
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1
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4.9k
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Comment: C: create design matrix when 2 groups of gene-expression data
9.2 years ago mheydarpour ▴ 10
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4.9k
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Comment: C: create design matrix when 2 groups of gene-expression data
9.2 years ago mheydarpour ▴ 10
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1
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4.9k
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Comment: C: create design matrix when 2 groups of gene-expression data
9.2 years ago mheydarpour ▴ 10
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4.9k
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Comment: C: create design matrix when 2 groups of gene-expression data
9.3 years ago mheydarpour ▴ 10
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4.9k
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Comment: C: create design matrix when 2 groups of gene-expression data
9.3 years ago mheydarpour ▴ 10
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4.9k
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Answer: A: create design matrix when 2 groups of gene-expression data
9.3 years ago mheydarpour ▴ 10
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4.9k
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Answer: A: create design matrix when 2 groups of gene-expression data
9.3 years ago mheydarpour ▴ 10
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Answer: A: Limma- missing values in covariate file
9.3 years ago mheydarpour ▴ 10
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8
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3.4k
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Limma- missing values in covariate file
limma
9.3 years ago mheydarpour ▴ 10
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1
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3.4k
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Answer: A: Limma- missing values in covariate file
9.3 years ago mheydarpour ▴ 10
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1
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3.4k
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Answer: A: Limma- missing values in covariate file
9.3 years ago mheydarpour ▴ 10
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3
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4.1k
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how to use Normalized gene expression data in Deseq2?
Deseq2
updated 9.3 years ago by 52k • written 9.3 years ago by ▴ 10
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