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Comment: C: TopGo package
10.7 years ago Adrian Alexa ▴ 400
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Student Internships at Illumina Cambridge Ltd, UK
Sequencing BaseSpaceR Sequencing BaseSpaceR
10.8 years ago Adrian Alexa ▴ 400
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Comment: C: Find enriched GO terms, given a list of GO terms of interest and background GO t
10.9 years ago Adrian Alexa ▴ 400
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New GO terms after TopGO enrichment? (updated)
GO topGO GO topGO
updated 11.1 years ago by ▴ 160 • written 11.1 years ago by ▴ 400
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topGO analysis returns different gene counts for category than given for non-model organism
Annotation GO topGO Annotation GO topGO
updated 11.2 years ago by ▴ 20 • written 11.2 years ago by ▴ 400
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Answer: A: [topGO] More flexible way to select 'interesting' genes
11.3 years ago Adrian Alexa ▴ 400
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Answer: A: topGO Fisher test error
11.6 years ago Adrian Alexa ▴ 400
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1.3k
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Student Internships at Illumina Cambridge Ltd.
Sequencing Sequencing
11.8 years ago • updated 11.7 years ago Adrian Alexa ▴ 400
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1.3k
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Answer: A: Student Internships at Illumina Cambridge Ltd.
11.7 years ago Adrian Alexa ▴ 400
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how to supply a vector/list of results to GenTable in topGO?
GO PROcess topGO GO PROcess topGO
11.8 years ago Adrian Alexa ▴ 400
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Answer: A: problems generating a gene2GOlist in topGO
12.7 years ago Adrian Alexa ▴ 400
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Answer: A: topGO sensitive to the order of "interesting" gene ids
13.8 years ago Adrian Alexa ▴ 400
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extracting topGO gene ids from result object
Annotation GO graph GOstats topGO Annotation GO graph GOstats topGO
updated 13.9 years ago by ▴ 20 • written 13.9 years ago by ▴ 400
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Answer: A: topGO and Arabidopsis data
14.0 years ago Adrian Alexa ▴ 400
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Answer: A: topGO documentation / clarification
14.3 years ago Adrian Alexa ▴ 400
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Answer: A: Gene Ontology analysis for non-affy data
15.2 years ago Adrian Alexa ▴ 400
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Answer: A: error with display of significant nodes using topGO
15.2 years ago Adrian Alexa ▴ 400
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Comment: C: "topGOdata" object: How to supply gene scores with a predefined list of genes
15.2 years ago Adrian Alexa ▴ 400
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Answer: A: "topGOdata" object: How to supply gene scores with a predefined list of genes
15.2 years ago Adrian Alexa ▴ 400
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Comment: C: annFUN.gene2GO in topGO package
15.3 years ago Adrian Alexa ▴ 400
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Comment: C: Analysis HumanHT-12 Illumina
15.4 years ago Adrian Alexa ▴ 400
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Answer: A: topGO enrichment using ensembl gene list
15.7 years ago Adrian Alexa ▴ 400
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Answer: A: Bug in topGO-package [topGO_1.10.0: GenTable-function]
16.0 years ago Adrian Alexa ▴ 400
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Comment: C: topGO question
16.2 years ago Adrian Alexa ▴ 400
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Answer: A: topGO question
16.2 years ago Adrian Alexa ▴ 400
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Answer: A: new topGO results using GO.db very different from old ones using GO
16.6 years ago Adrian Alexa ▴ 400
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topGO and GOstats conflict
GO GOstats topGO GO GOstats topGO
16.7 years ago Adrian Alexa ▴ 400
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topGO enrichment using ensembl gene list
Microarray Annotation GO PROcess globaltest topGO Microarray Annotation GO PROcess topGO
16.7 years ago Adrian Alexa ▴ 400
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Answer: A: GO-Analysis using TopGO for Yeast2 data
16.7 years ago Adrian Alexa ▴ 400
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Answer: A: how can I use the limma result as input in topGo
17.0 years ago Adrian Alexa ▴ 400
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Comment: C: how to build a GOstats-compatible annotation package for plasmodium falciparum?
17.1 years ago Adrian Alexa ▴ 400
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Answer: A: GO analysis code snippet
17.3 years ago Adrian Alexa ▴ 400
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Postdoctoral position for 'Statistical Methods in Bioinformatics'
Genetics HIV Genetics HIV
18.0 years ago Adrian Alexa ▴ 400
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3.9k
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More advance node labeling in Graphviz
Rgraphviz Rgraphviz
updated 20.0 years ago by ★ 13k • written 20.0 years ago by ▴ 400
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656
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Bug in function hasGOannote() form GOstats package
GOstats GOstats
20.1 years ago Adrian Alexa ▴ 400
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645
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Comment: C: More environments facilities ?
20.2 years ago Adrian Alexa ▴ 400
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2
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645
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More environments facilities ?
Biobase Biobase
updated 20.2 years ago by ★ 5.5k • written 20.2 years ago by ▴ 400
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