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0
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749
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Comment:
Comment: DeSeq2 design fails (full model matrix is less than full rank)
14 months ago
Theo
▴ 10
0
votes
1
reply
749
views
Comment:
Comment: DeSeq2 design fails (full model matrix is less than full rank)
14 months ago
Theo
▴ 10
0
votes
5
replies
749
views
DeSeq2 design fails (full model matrix is less than full rank)
DESeq2
updated 14 months ago by
James W. MacDonald
67k • written 14 months ago by
Theo
▴ 10
0
votes
1
reply
1.2k
views
Comment:
Comment: DESeq2 alternative hypyothesis: testing for genes NOT significantly downregulate
15 months ago
Theo
▴ 10
0
votes
0
replies
1.2k
views
Comment:
Comment: diffbind dba.count error "files could not be accessed" on windows 11
16 months ago
Theo
▴ 10
0
votes
1
reply
1.2k
views
Comment:
Comment: diffbind dba.count error "files could not be accessed" on windows 11
16 months ago
Theo
▴ 10
1
vote
4
replies
1.2k
views
diffbind dba.count error "files could not be accessed" on windows 11
DiffBind
16 months ago
Theo
▴ 10
0
votes
1
reply
2.0k
views
Comment:
Comment: ranking the DeSeq2 results using t-values?
17 months ago
Theo
▴ 10
0
votes
0
replies
2.0k
views
Comment:
Comment: ranking the DeSeq2 results using t-values?
17 months ago
Theo
▴ 10
0
votes
1
reply
2.0k
views
Comment:
Comment: ranking the DeSeq2 results using t-values?
17 months ago
Theo
▴ 10
0
votes
9
replies
2.0k
views
ranking the DeSeq2 results using t-values?
DESeq2
updated 17 months ago by
Michael Love
43k • written 17 months ago by
Theo
▴ 10
0
votes
1
reply
2.0k
views
Comment:
Comment: ranking the DeSeq2 results using t-values?
17 months ago
Theo
▴ 10
0
votes
1
reply
1.1k
views
Comment:
Comment: how to iterate all comparisons in group with "coef =" ?
22 months ago
Theo
▴ 10
0
votes
3
replies
1.1k
views
how to iterate all comparisons in group with "coef =" ?
DESeq2
updated 22 months ago by
Michael Love
43k • written 22 months ago by
Theo
▴ 10
0
votes
1
reply
1.6k
views
use diffbind with normilized bedgraph files from spike ins
diffbind
chip-seq
chip
spike
spike-ins
updated 4.5 years ago by
Rory Stark
★ 5.2k • written 4.6 years ago by
Theo
▴ 10
1
vote
4
replies
1.1k
views
in diffbind dba.peakset what is the meaning of minOverlap?
diffbind
chip-seq
dba.peakset
updated 5.1 years ago by
Rory Stark
★ 5.2k • written 5.1 years ago by
Theo
▴ 10
0
votes
0
replies
1.1k
views
Comment:
C: in diffbind dba.peakset what is the meaning of minOverlap?
5.1 years ago
Theo
▴ 10
0
votes
1
reply
1.1k
views
Comment:
C: in diffbind dba.peakset what is the meaning of minOverlap?
5.1 years ago
Theo
▴ 10
0
votes
1
reply
778
views
Comment:
C: diffbind plotVenn by Factor
5.1 years ago
Theo
▴ 10
0
votes
3
replies
778
views
diffbind plotVenn by Factor
diffbind
plotVenn
updated 5.1 years ago by
Rory Stark
★ 5.2k • written 5.1 years ago by
Theo
▴ 10
0
votes
1
reply
1.8k
views
Comment:
C: DeSeq2 Design (A-B)-(C-D)
5.1 years ago
Theo
▴ 10
0
votes
1
reply
1.8k
views
Comment:
C: DeSeq2 Design (A-B)-(C-D)
5.1 years ago
Theo
▴ 10
0
votes
0
replies
1.5k
views
Comment:
C: diffbind dba.plotvolcano bLabels option use genames instead of numbers
5.2 years ago
Theo
▴ 10
0
votes
1
reply
1.5k
views
Comment:
C: diffbind dba.plotvolcano bLabels option use genames instead of numbers
5.2 years ago
Theo
▴ 10
0
votes
4
replies
1.5k
views
diffbind dba.plotvolcano bLabels option use genames instead of numbers
diffbind
updated 5.3 years ago by
Rory Stark
★ 5.2k • written 5.4 years ago by
Theo
▴ 10
0
votes
0
replies
1.8k
views
Answer:
A: Normalized count in edger
5.4 years ago
Theo
▴ 10
0
votes
1
reply
3.0k
views
error in readPeakFile {chipseeker}
ChIPseeker
readPeakFile
5.5 years ago
Theo
▴ 10
0
votes
0
replies
1.3k
views
Comment:
C: Problem in using covplot ChIPseeker
5.5 years ago
Theo
▴ 10
0
votes
1
reply
2.2k
views
Comment:
C: atacseqQC error while splittin the bamfile
5.5 years ago
Theo
▴ 10
0
votes
0
replies
2.2k
views
Comment:
C: atacseqQC error while splittin the bamfile
5.5 years ago
Theo
▴ 10
0
votes
6
replies
2.2k
views
atacseqQC error while splittin the bamfile
ATACseqQC
ATAC-seq
error
split bam file
updated 5.6 years ago by
contact
• 0 • written 5.6 years ago by
Theo
▴ 10
0
votes
0
replies
1.3k
views
Is it possible to use Rnbeads with WGBS data from epigenetics roadmap/ucsc data
rnbeads
wgbs
7.2 years ago
Theo
▴ 10
0
votes
0
replies
1.8k
views
Comment:
C: FourCseq: getZScores errors, first case 6 digenerated cutterm second case 4 base
8.3 years ago
Theo
▴ 10
0
votes
0
replies
1.1k
views
Comment:
C: FourCseq, rawRanges Description
8.3 years ago
Theo
▴ 10
0
votes
2
replies
1.1k
views
FourCseq, rawRanges Description
fourcseq
updated 8.3 years ago by
felix.klein
▴ 150 • written 8.3 years ago by
Theo
▴ 10
1
vote
8
replies
1.8k
views
FourCseq: getZScores errors, first case 6 digenerated cutterm second case 4 base cutter
fourcseq
8.3 years ago
Theo
▴ 10
0
votes
1
reply
1.8k
views
Answer:
A: FourCseq: getZScores errors, first case 6 digenerated cutterm second case 4 base
8.3 years ago
Theo
▴ 10
0
votes
1
reply
1.8k
views
Comment:
C: FourCseq: getZScores errors, first case 6 digenerated cutterm second case 4 base
8.3 years ago
Theo
▴ 10
0
votes
1
reply
1.8k
views
Answer:
A: FourCseq: getZScores errors, first case 6 digenerated cutterm second case 4 base
8.3 years ago
Theo
▴ 10
0
votes
2
replies
1.0k
views
FourCseq: mixed amount of replication/samples
fourcseq
8.3 years ago
Theo
▴ 10
0
votes
0
replies
1.0k
views
Answer:
A: FourCseq: mixed amount of replication/samples
8.3 years ago
Theo
▴ 10
0
votes
0
replies
1.1k
views
Answer:
A: Basic4Cseq, degenerate sites
8.4 years ago
Theo
▴ 10
0
votes
2
replies
1.1k
views
Basic4Cseq, degenerate sites
Basic4Cseq
basic4cseq
degenerate sites
8.4 years ago
Theo
▴ 10
0
votes
1
reply
4.3k
views
Comment:
C: FourCseq - error countFragmentOverlaps()
8.4 years ago
Theo
▴ 10
0
votes
0
replies
1.0k
views
r3cseq error after finishing the work
r3cseq
4c
9.3 years ago
Theo
▴ 10
0
votes
0
replies
4.3k
views
Comment:
C: FourCseq - error countFragmentOverlaps()
9.5 years ago
Theo
▴ 10
0
votes
1
reply
4.3k
views
Comment:
C: FourCseq - error countFragmentOverlaps()
9.5 years ago
Theo
▴ 10
4
votes
27
replies
4.3k
views
FourCseq - error countFragmentOverlaps()
FourCseq
fourcseq
updated 9.5 years ago by
ericaenjoy3
• 0 • written 9.5 years ago by
Theo
▴ 10
0
votes
1
reply
4.3k
views
Answer:
A: FourCseq - error countFragmentOverlaps()
9.5 years ago
Theo
▴ 10
0
votes
0
replies
4.3k
views
Answer:
A: FourCseq - error countFragmentOverlaps()
9.5 years ago
Theo
▴ 10
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