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Comment: C: DESeq2: experiment with two genotypes and three conditions
4.7 years ago wd ▴ 30
0
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0
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2.7k
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Comment: C: avereps with probes mapping to multiple genes (Agilent dual color microarray)
5.9 years ago wd ▴ 30
0
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1
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2.7k
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Comment: C: avereps with probes mapping to multiple genes (Agilent dual color microarray)
5.9 years ago wd ▴ 30
12
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4
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4.8k
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differential expression analysis of htseq data with edgeR/voom
voom htseq edgeR limma RNASeq123
updated 5.9 years ago by 51k • written 7.5 years ago by ▴ 30
1
vote
12
replies
2.7k
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avereps with probes mapping to multiple genes (Agilent dual color microarray)
limma avereps probe mapping microarray Agilent
updated 5.9 years ago by 51k • written 5.9 years ago by ▴ 30
0
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1
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2.7k
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Comment: C: avereps with probes mapping to multiple genes (Agilent dual color microarray)
5.9 years ago wd ▴ 30
0
votes
1
reply
2.7k
views
Comment: C: avereps with probes mapping to multiple genes (Agilent dual color microarray)
5.9 years ago wd ▴ 30
0
votes
1
reply
2.7k
views
Comment: C: avereps with probes mapping to multiple genes (Agilent dual color microarray)
5.9 years ago wd ▴ 30
0
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0
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3.0k
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Comment: C: avereps(): 'ProbeName' or 'SystematicName' for agilent one-channel microarray?
5.9 years ago wd ▴ 30
0
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1
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3.0k
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Comment: C: avereps(): 'ProbeName' or 'SystematicName' for agilent one-channel microarray?
5.9 years ago wd ▴ 30
0
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1
reply
4.4k
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Comment: C: DESEq2 comparison with two conditions and paired experiments
6.0 years ago wd ▴ 30
0
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1
reply
4.4k
views
Comment: C: DESEq2 comparison with two conditions and paired experiments
6.0 years ago wd ▴ 30
0
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0
replies
4.8k
views
Comment: C: differential expression analysis of htseq data with edgeR/voom
7.1 years ago wd ▴ 30
0
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0
replies
1.2k
views
height boxes gene models GeneRegionTrack Gviz
Gviz stack generegiontrack
7.1 years ago wd ▴ 30
0
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0
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2.4k
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Comment: C: R Gviz ideogram custom track
7.1 years ago wd ▴ 30
0
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3
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2.4k
views
R Gviz ideogram custom track
Gviz ideogram track custom genome R
7.1 years ago wd ▴ 30
4
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5
replies
7.3k
views
outlier detection of RNAseq samples
deseq2 rnaseq PCA hierarchical clustering outlier
8.0 years ago wd ▴ 30
0
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0
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7.3k
views
Answer: A: outlier detection of RNAseq samples
8.0 years ago wd ▴ 30
0
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0
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1.2k
views
extractUpstreamSeqs with custom genome, no gene_id shown
genomicranges txdb genomicfeatures featureextraction
updated 8.6 years ago by 25k • written 8.6 years ago by ▴ 30
0
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0
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1.4k
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Comment: C: calculate total transcript length from DisjointExons output (Genomic Ranges Obje
8.6 years ago wd ▴ 30
0
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1
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1.4k
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Comment: C: calculate total transcript length from DisjointExons output (Genomic Ranges Obje
8.6 years ago wd ▴ 30
1
vote
4
replies
1.4k
views
calculate total transcript length from DisjointExons output (Genomic Ranges Object)
genomicfeatures non overlapping exons genomicranges granges
updated 8.6 years ago by ★ 11k • written 8.6 years ago by ▴ 30
0
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1
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5.5k
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Comment: C: DESEQ2 with 3 biological replicates for control and 1 biological replicate for t
9.0 years ago wd ▴ 30
0
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1
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5.5k
views
Comment: C: DESEQ2 with 3 biological replicates for control and 1 biological replicate for t
9.0 years ago wd ▴ 30
2
votes
10
replies
5.5k
views
DESEQ2 with 3 biological replicates for control and 1 biological replicate for treatment
DESEQ deseq2 deseq replicates biologicalreplicates
9.0 years ago wd ▴ 30
0
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1
reply
4.0k
views
ape - delete bootstrap values (node.labels) less than a certain value
ape bootstrap node phylogenetic tree
9.4 years ago wd ▴ 30
0
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3
replies
1.8k
views
problem with update limma - green channel missing
limma bioconductor read.maimages agilent 8x60K
9.7 years ago wd ▴ 30
0
votes
1
reply
1.8k
views
Comment: A: problem with update limma - green channel missing
9.7 years ago wd ▴ 30
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