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10
votes
6
replies
15k
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DESEq2 VST error
deseq2
variancestabilizingtransformation
updated 2.3 years ago by
Muhammad
• 0 • written 7.3 years ago by
anpham
▴ 60
0
votes
4
replies
3.1k
views
how to handle missing data for SampleTable in DESeq2
deseq2
sample_table
missing data
updated 5.8 years ago by
g.wang2
• 0 • written 9.7 years ago by
anpham
▴ 60
4
votes
9
replies
5.5k
views
remove X and Y chromosome genes in RNA-seq data using DESeq2 pipeline
deseq2
rnaseq
updated 6.4 years ago by
ta_awwad
▴ 10 • written 9.6 years ago by
anpham
▴ 60
0
votes
0
replies
3.1k
views
Comment:
C: Expression profile from $E from Voom
7.2 years ago
anpham
▴ 60
4
votes
4
replies
3.1k
views
Expression profile from $E from Voom
Voom
$EList
updated 7.2 years ago by
Steve Lianoglou
★ 13k • written 7.2 years ago by
anpham
▴ 60
1
vote
1
reply
1.1k
views
RNA-seq differential analysis for continuous phenotypes
deseq2
rna-seq
updated 7.3 years ago by
Michael Love
43k • written 7.3 years ago by
anpham
▴ 60
0
votes
1
reply
15k
views
Comment:
A: DESEq2 VST error
7.3 years ago
anpham
▴ 60
2
votes
9
replies
21k
views
DESeq2 Error: ncol(countData) == nrow(colData) is not TRUE
deseq2
error
updated 3.2 years ago by
Michael Love
43k • written 7.4 years ago by
anpham
▴ 60
0
votes
1
reply
1.8k
views
Comment:
C: rlog transformation using DESeq2
8.1 years ago
anpham
▴ 60
0
votes
3
replies
1.8k
views
rlog transformation using DESeq2
rlog transformation
deseq2
updated 8.1 years ago by
Michael Love
43k • written 8.1 years ago by
anpham
▴ 60
1
vote
0
replies
2.0k
views
Answer:
A: Subset SummarizedExperiment/GRangesList by seqnames
9.6 years ago
anpham
▴ 60
0
votes
1
reply
5.5k
views
Comment:
A: remove X and Y chromosome genes in RNA-seq data using DESeq2 pipeline
9.6 years ago
anpham
▴ 60
0
votes
1
reply
2.7k
views
Adding gene names to differential gene expression results in DESeq2
deseq2
gene names
differential gene expression
updated 9.7 years ago by
Michael Love
43k • written 9.7 years ago by
anpham
▴ 60
0
votes
1
reply
1.6k
views
meta-analysis of RNA-seq data
deseq2
rna-seq
9.8 years ago
anpham
▴ 60
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