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Answer: A: GOseq package: Which genes are included in the "numDEInCat"?
8.1 years ago b.nota ▴ 370
2
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3
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3.0k
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Goseq analysis with Biocarta, Reactome, and NCI pathways?
goseq graphite
10.0 years ago • updated 8.2 years ago b.nota ▴ 370
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1
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4.1k
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Comment: C: Error with ChIPpeakAnno Ensembl annotation
8.2 years ago b.nota ▴ 370
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4.1k
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Comment: C: Error with ChIPpeakAnno Ensembl annotation
8.2 years ago b.nota ▴ 370
3
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5
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4.1k
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Error with ChIPpeakAnno Ensembl annotation
ChIPpeakAnno genomicfeatures
updated 8.2 years ago by ★ 4.3k • written 8.2 years ago by ▴ 370
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2
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2.0k
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Comment: C: mzR failed to open '.raw' file
8.3 years ago b.nota ▴ 370
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4
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2.0k
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mzR failed to open '.raw' file
mzR .raw files
updated 8.3 years ago by 1.6k • written 8.3 years ago by ▴ 370
0
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6.1k
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Comment: C: RNAseq, what to do if you have no replicates in voom-limma
8.4 years ago b.nota ▴ 370
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0
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1.4k
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Comment: C: ROAST after edgeR glmTreat and average RPKM filter
8.4 years ago b.nota ▴ 370
3
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2
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1.4k
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ROAST after edgeR glmTreat and average RPKM filter
roast edgeR glmtreat
updated 8.4 years ago by ★ 28k • written 8.4 years ago by ▴ 370
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1.3k
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Comment: C: filtering agilent microarray data using limma in R
8.5 years ago b.nota ▴ 370
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703
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Comment: C: Functions from my own developed library not working
8.6 years ago b.nota ▴ 370
2
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2
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703
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Functions from my own developed library not working
R
updated 8.6 years ago by 25k • written 8.6 years ago by ▴ 370
0
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2
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3.4k
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Comment: C: Clustering and bootstrapping of RNASeq samples
8.7 years ago b.nota ▴ 370
2
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2
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3.9k
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Answer: A: about paired-samples in edgeR
8.7 years ago b.nota ▴ 370
0
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2.5k
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Comment: C: microarray data analsis with limma?
8.7 years ago b.nota ▴ 370
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3.8k
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Comment: C: Can't make working link in roxygen2
8.8 years ago b.nota ▴ 370
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0
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3.8k
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Comment: C: Can't make working link in roxygen2
8.8 years ago b.nota ▴ 370
3
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4
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3.8k
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Can't make working link in roxygen2
roxygen2
updated 8.8 years ago by ★ 13k • written 8.8 years ago by ▴ 370
3
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1
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900
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Answer: A: Using p.nominal DE genes from limma
8.8 years ago b.nota ▴ 370
1
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2.1k
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Comment: C: PCA clusters by replicates not by study groups
8.8 years ago b.nota ▴ 370
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1
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2.1k
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Comment: C: PCA clusters by replicates not by study groups
8.8 years ago b.nota ▴ 370
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0
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5.4k
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Answer: A: Design matrix not of full rank
8.9 years ago b.nota ▴ 370
1
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1
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5.7k
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Comment: C: DESEq2 - Why is "my gene" not differentially expressed?
8.9 years ago b.nota ▴ 370
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5.7k
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Answer: A: DESEq2 - Why is "my gene" not differentially expressed?
8.9 years ago b.nota ▴ 370
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0
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1.9k
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Answer: A: gene set (enrichment) analysis
8.9 years ago b.nota ▴ 370
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0
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21k
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Comment: C: Heatmap with error message: `x' must be a numeric matrix
8.9 years ago b.nota ▴ 370
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1
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21k
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Comment: C: Heatmap with error message: `x' must be a numeric matrix
8.9 years ago b.nota ▴ 370
0
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1
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21k
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Comment: C: Heatmap with error message: `x' must be a numeric matrix
8.9 years ago b.nota ▴ 370
0
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1
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21k
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Answer: A: Heatmap with error message: `x' must be a numeric matrix
8.9 years ago b.nota ▴ 370
1
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0
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2.6k
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Comment: C: about loding BSgenome.Hsapiens.UCSC.hg19 package
8.9 years ago b.nota ▴ 370
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1
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2.0k
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Comment: C: data acquisition using biomaRt
8.9 years ago b.nota ▴ 370
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0
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1.8k
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Comment: C: Print to txt file in specific way
8.9 years ago b.nota ▴ 370
0
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0
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1.9k
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Comment: C: Normalisation of RNA seq data
9.0 years ago b.nota ▴ 370
0
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1
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1.9k
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Comment: C: Normalisation of RNA seq data
9.0 years ago b.nota ▴ 370
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3.0k
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Comment: C: ABOUT CPM FILTERING IN EDGER
9.0 years ago b.nota ▴ 370
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0
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5.5k
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Comment: C: featureCounts (sourceforge) not returning any counts in count table, even though
9.0 years ago b.nota ▴ 370
1
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1
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3.1k
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Comment: C: Affymetrix fold change [newbie question]
9.0 years ago b.nota ▴ 370
1
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1
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3.1k
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Comment: C: Affymetrix fold change [newbie question]
9.0 years ago b.nota ▴ 370
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2
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3.1k
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Comment: C: Affymetrix fold change [newbie question]
9.0 years ago b.nota ▴ 370
1
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1
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3.1k
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Answer: A: Affymetrix fold change [newbie question]
9.0 years ago b.nota ▴ 370
0
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1
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5.5k
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Comment: C: featureCounts (sourceforge) not returning any counts in count table, even though
9.0 years ago b.nota ▴ 370
1
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1
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3.1k
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Answer: A: Affymetrix fold change [newbie question]
9.0 years ago b.nota ▴ 370
0
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1
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4.4k
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Comment: C: Deseq2 unsupervised analysis
9.0 years ago b.nota ▴ 370
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1.4k
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Answer: A: Error in MAIT
9.0 years ago b.nota ▴ 370
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2.7k
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Comment: C: goseq: Can't find mm10/geneSymbol length data in genLenDataBase...
9.0 years ago b.nota ▴ 370
0
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0
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2.9k
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Comment: C: How to use GOseq without length bias
9.1 years ago b.nota ▴ 370
0
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1
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2.9k
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Comment: C: How to use GOseq without length bias
9.1 years ago b.nota ▴ 370
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1
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2.9k
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Comment: C: How to use GOseq without length bias
9.1 years ago b.nota ▴ 370
3
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10
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2.9k
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How to use GOseq without length bias
goseq
updated 9.1 years ago by ★ 13k • written 9.1 years ago by ▴ 370
144 results • Page 2 of 3
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