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Comment: C: breakTies for a Hits-object based on value in mcols?
7.0 years ago Jeff Johnston ▴ 90
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Comment: C: Extract coordinates of overlapping genomic intervals
8.4 years ago Jeff Johnston ▴ 90
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Comment: C: Extract coordinates of overlapping genomic intervals
8.4 years ago Jeff Johnston ▴ 90
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Answer: A: Extract coordinates of overlapping genomic intevals
8.4 years ago Jeff Johnston ▴ 90
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Comment: C: Group GRanges and keep metadata
8.6 years ago Jeff Johnston ▴ 90
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Answer: A: export BSgenome directly in gzipped fasta
8.7 years ago Jeff Johnston ▴ 90
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Comment: C: Is there an easy way to extend coverage to seqlengths and fill with zeroes?
8.9 years ago Jeff Johnston ▴ 90
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Comment: C: updateObject() fails for old serialized GRanges objects
10.1 years ago Jeff Johnston ▴ 90
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updateObject() fails for old serialized GRanges objects
genomicranges
updated 10.1 years ago by 16k • written 10.1 years ago by ▴ 90
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Thread safety of BSgenome getSeq()
Cancer BSgenome PROcess BSgenome Rsamtools Cancer BSgenome PROcess BSgenome Rsamtools
updated 10.5 years ago by 16k • written 10.5 years ago by ▴ 90
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Thread safety of BSgenome getSeq()
BSgenome BSgenome BSgenome BSgenome
updated 10.5 years ago by 16k • written 10.6 years ago by ▴ 90
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Answer: A: Approaches to building Rle sequences from ranges
10.6 years ago Jeff Johnston ▴ 90
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Answer: A: granges() method for GenomicRanges objects akin to ranges()...
10.7 years ago Jeff Johnston ▴ 90
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Indexing an RleList by GRanges
10.7 years ago Jeff Johnston ▴ 90
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