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Comment: C: Does package S4Vectors break ifelse?
9.2 years ago Malcolm Cook ★ 1.6k
0
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1
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4.3k
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Answer: A: GRanges - add names when constructing a new GRanges, rather than afterwards?
9.2 years ago Malcolm Cook ★ 1.6k
0
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1
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2.7k
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Comment: C: Does package S4Vectors break ifelse?
9.3 years ago Malcolm Cook ★ 1.6k
0
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1
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7.2k
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Comment: C: Importing a .txt file with multiple headers into R
9.6 years ago Malcolm Cook ★ 1.6k
2
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1
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7.2k
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Answer: A: Importing a .txt file with multiple headers into R
9.6 years ago Malcolm Cook ★ 1.6k
0
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1
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1.7k
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Comment: C: Using a single R installation with multiple BioConductor library installations -
9.6 years ago Malcolm Cook ★ 1.6k
3
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3
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1.7k
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Using a single R installation with multiple BioConductor library installations - opinions & best practices sought
version release library
updated 9.6 years ago by ▴ 400 • written 9.6 years ago by ★ 1.6k
0
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1
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2.7k
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Comment: C: makeTranscriptDbFromBiomart failure from Data Anomaly
9.7 years ago Malcolm Cook ★ 1.6k
7
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5
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4.3k
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Is Bioconductor 3.0 compatible with R 3.1.2?
version compatibility
updated 10.0 years ago by ▴ 220 • written 10.0 years ago by ★ 1.6k
0
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0
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4.3k
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Comment: C: Is Bioconductor 3.0 compatible with R 3.1.2?
10.0 years ago Malcolm Cook ★ 1.6k
0
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1
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2.4k
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Comment: C: granges() method for GenomicRanges objects akin to ranges()...
10.5 years ago Malcolm Cook ★ 1.6k
0
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1
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2.4k
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Comment: C: granges() method for GenomicRanges objects akin to ranges()...
10.5 years ago Malcolm Cook ★ 1.6k
0
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1
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4.2k
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Comment: C: Blast analysis of two sequences in R
10.6 years ago Malcolm Cook ★ 1.6k
0
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1
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758
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Answer: A: Bioconductor newsletter: April 2014
10.6 years ago Malcolm Cook ★ 1.6k
0
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0
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4.2k
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Answer: A: fasta biostrings bioconductor
10.6 years ago Malcolm Cook ★ 1.6k
0
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0
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1.9k
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Comment: C: Obtain overlap coordinates in GenomicRanges findSpliceOverlaps
10.7 years ago Malcolm Cook ★ 1.6k
0
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0
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1.9k
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Comment: C: Obtain overlap coordinates in GenomicRanges findSpliceOverlaps
10.7 years ago Malcolm Cook ★ 1.6k
0
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1
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1.9k
views
Comment: C: Obtain overlap coordinates in GenomicRanges findSpliceOverlaps
10.7 years ago Malcolm Cook ★ 1.6k
0
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0
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3.4k
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Comment: C: overlap regions between two GRanges (or GRangesList)
10.7 years ago Malcolm Cook ★ 1.6k
0
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2
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1.1k
views
IRanges::Rle::[ arguably should return NA when i is out of range
updated 10.7 years ago by 16k • written 10.7 years ago by ★ 1.6k
0
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1
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404
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IRanges/List oddity: do.call of `c` on a list of IRangesList returns
updated 10.7 years ago by 16k • written 10.8 years ago by ★ 1.6k
0
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2
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1.9k
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subsetting SummarizedExperiments - a proposal (or a hack?)
Cancer IRanges GenomicRanges PROMISE Cancer IRanges GenomicRanges PROMISE
updated 10.8 years ago by ★ 13k • written 10.8 years ago by ★ 1.6k
0
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0
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1.8k
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Comment: C: subsetting SummarizedExperiments - a proposal (or a hack?)
10.8 years ago Malcolm Cook ★ 1.6k
0
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0
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1.8k
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Comment: C: subsetting SummarizedExperiments - a proposal (or a hack?)
10.8 years ago Malcolm Cook ★ 1.6k
0
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7
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1.8k
views
subsetting SummarizedExperiments - a proposal (or a hack?)
updated 10.8 years ago by 25k • written 10.8 years ago by ★ 1.6k
0
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0
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730
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summarizeOverlaps colData does NOT contain countBam() summary data
10.8 years ago Malcolm Cook ★ 1.6k
0
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1
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451
views
error in "count" for SummarizedExperiment in easyRNASeq
updated 10.9 years ago by ▴ 320 • written 10.9 years ago by ★ 1.6k
0
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0
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4.4k
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Comment: C: subset a RleList using GRanges object?
10.9 years ago Malcolm Cook ★ 1.6k
0
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1
reply
2.7k
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Answer: A: scholarly reference for "don't draw PCA/heatmap dendrograms on DEGs"
10.9 years ago Malcolm Cook ★ 1.6k
0
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0
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4.4k
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Comment: C: subset a RleList using GRanges object?
10.9 years ago Malcolm Cook ★ 1.6k
0
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1
reply
896
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Answer: A: Gviz - Plot genes and data from - strand (3'-5') in 5'-3' direction
10.9 years ago Malcolm Cook ★ 1.6k
0
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1
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4.4k
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Comment: C: subset a RleList using GRanges object?
10.9 years ago Malcolm Cook ★ 1.6k
0
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1
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2.0k
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Comment: C: GGally ggbio conflict/bug
11.0 years ago Malcolm Cook ★ 1.6k
0
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2
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1.9k
views
autoplot transcriptDb error with some regions
TranscriptDb biovizBase ggbio TranscriptDb biovizBase ggbio
updated 11.0 years ago by ▴ 490 • written 11.0 years ago by ★ 1.6k
0
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0
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2.1k
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Comment: C: bug in GenomicRanges gaps?
11.2 years ago Malcolm Cook ★ 1.6k
0
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1
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756
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BUG: median(IRanges::Rle(NA), na.rm=TRUE)) should return NA
updated 11.2 years ago by 16k • written 11.2 years ago by ★ 1.6k
0
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1
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2.1k
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Answer: A: bug in GenomicRanges gaps?
11.2 years ago Malcolm Cook ★ 1.6k
0
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0
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684
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BUG: median(IRanges::Rle(NA),na.rm=TRUE)) should return NA
11.2 years ago Malcolm Cook ★ 1.6k
0
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0
replies
1.9k
views
Comment: C: Using precede()/follow() to find two ranges
11.2 years ago Malcolm Cook ★ 1.6k
0
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1
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1.9k
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Comment: C: Using precede()/follow() to find two ranges
11.2 years ago Malcolm Cook ★ 1.6k
0
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0
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1.9k
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Comment: C: Using precede()/follow() to find two ranges
11.2 years ago Malcolm Cook ★ 1.6k
0
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1
reply
1.9k
views
Comment: C: Using precede()/follow() to find two ranges
11.2 years ago Malcolm Cook ★ 1.6k
0
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1
reply
1.9k
views
Comment: C: Using precede()/follow() to find two ranges
11.2 years ago Malcolm Cook ★ 1.6k
0
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1
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2.9k
views
Answer: A: Order within a GRanges object
11.2 years ago Malcolm Cook ★ 1.6k
0
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1
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1.2k
views
Comment: C: BUG? when setting mcols of a GRanges to a DataFrame one of whose columns is an o
11.3 years ago Malcolm Cook ★ 1.6k
0
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0
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1.7k
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Comment: C: GViz - successes and a few hopes
11.3 years ago Malcolm Cook ★ 1.6k
0
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3
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1.2k
views
BUG? when setting mcols of a GRanges to a DataFrame one of whose columns is an ordered factor
updated 11.3 years ago by 16k • written 11.3 years ago by ★ 1.6k
0
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2
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1.7k
views
GViz - successes and a few hopes
annotate Gviz annotate Gviz
updated 11.3 years ago by ★ 1.6k • written 11.3 years ago by ★ 1.6k
0
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0
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1.1k
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Comment: C: ggbio facet_gr example sought
11.3 years ago Malcolm Cook ★ 1.6k
0
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3
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1.1k
views
ggbio facet_gr example sought
updated 11.3 years ago by ★ 11k • written 11.3 years ago by ★ 1.6k
191 results • Page 2 of 4
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