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2
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1.9k
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Answer: A: Bowtie % mapped reads for DGE
9.0 years ago Dario Strbenac ★ 1.5k
0
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0
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2.9k
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Comment: C: Data download via TCGAbiolinks
9.0 years ago Dario Strbenac ★ 1.5k
0
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0
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2.2k
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Comment: C: How to create automated cbind in a for loop
9.0 years ago Dario Strbenac ★ 1.5k
0
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1
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1.5k
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Comment: C: Concatenation of Bimap
9.2 years ago Dario Strbenac ★ 1.5k
5
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7
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1.5k
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Concatenation of Bimap
AnnotationDbi Concatenate
updated 9.2 years ago by 68k • written 9.2 years ago by ★ 1.5k
0
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0
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Comment: C: vcountPattern for Pattern Contained within or Containing Subject
9.3 years ago Dario Strbenac ★ 1.5k
0
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1
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1.5k
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Answer: A: vcountPattern for Pattern Contained within or Containing Subject
9.3 years ago Dario Strbenac ★ 1.5k
2
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4
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1.5k
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vcountPattern for Pattern Contained within or Containing Subject
biostrings countpattern
9.3 years ago Dario Strbenac ★ 1.5k
0
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0
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1.5k
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Comment: C: isobar and iTRAQ data
9.6 years ago Dario Strbenac ★ 1.5k
2
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1
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1.4k
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naiveRandRUV Error When k is 1
RUVNormalize Subsetting
updated 9.6 years ago by ▴ 10 • written 9.7 years ago by ★ 1.5k
1
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0
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5.7k
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Comment: C: Can I use the WGCNA dendrogram to display a heatmap of gene expression?
9.7 years ago Dario Strbenac ★ 1.5k
0
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1
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5.7k
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Comment: C: Can I use the WGCNA dendrogram to display a heatmap of gene expression?
9.7 years ago Dario Strbenac ★ 1.5k
1
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1
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5.7k
views
Answer: A: Can I use the WGCNA dendrogram to display a heatmap of gene expression?
9.8 years ago Dario Strbenac ★ 1.5k
0
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0
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1.5k
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Comment: C: Journal articles for whole exome sequencing
9.8 years ago Dario Strbenac ★ 1.5k
1
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0
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4.9k
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Comment: C: Differential Analysis for gene expression from TCGA (Level 3)
9.8 years ago Dario Strbenac ★ 1.5k
0
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0
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3.7k
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Answer: A: Going crazy with normalizing TCGA raw rsem gene count
9.8 years ago Dario Strbenac ★ 1.5k
0
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1
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1.9k
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Comment: C: Strand-aware CSAW analysis
10.0 years ago Dario Strbenac ★ 1.5k
0
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0
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2.8k
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Comment: C: DEseq normalization paired t-test
10.2 years ago Dario Strbenac ★ 1.5k
0
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0
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1.8k
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Answer: A: data preparation for timecourse
10.2 years ago Dario Strbenac ★ 1.5k
1
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1
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16k
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Comment: C: Obtaining Differentially expressed gene lists at a Fold change and FDR cut-off
10.3 years ago Dario Strbenac ★ 1.5k
0
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0
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3.4k
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Answer: A: GFOLD file as input for DESeq2
10.4 years ago Dario Strbenac ★ 1.5k
0
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0
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1.3k
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Answer: A: Fwd: deepSNV error
10.5 years ago Dario Strbenac ★ 1.5k
0
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0
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1.3k
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Answer: A: deepSNV error
10.5 years ago Dario Strbenac ★ 1.5k
0
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0
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1.2k
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Comment: C: Please comment the way I'm thinking about the way to find differentially express
10.5 years ago Dario Strbenac ★ 1.5k
0
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0
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12k
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Answer: A: RNA-Seq, generate batch-free count matrix
10.6 years ago Dario Strbenac ★ 1.5k
0
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0
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1.9k
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Answer: A: deepSNV Question
10.6 years ago Dario Strbenac ★ 1.5k
0
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0
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1.9k
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Comment: C: deepSNV Question
10.6 years ago Dario Strbenac ★ 1.5k
0
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1
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1.9k
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Answer: A: deepSNV Question
10.6 years ago Dario Strbenac ★ 1.5k
0
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0
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1.1k
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Answer: A: blast nt seq vs protein seq
10.6 years ago Dario Strbenac ★ 1.5k
0
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5
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2.4k
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makeTranscriptDbFromGFF Error for UCSC GTF File
GenomicFeatures GenomicFeatures
updated 10.6 years ago by ★ 7.2k • written 10.6 years ago by ★ 1.5k
0
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1
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2.2k
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Comment: C: DESeq2 Regularised Log for Clustering of Genes
10.8 years ago Dario Strbenac ★ 1.5k
0
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0
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1.8k
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Comment: C: Elephant shark genome
10.8 years ago Dario Strbenac ★ 1.5k
0
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3
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1.7k
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MLSeq Mathematical Concepts
Classification edgeR DESeq MLSeq Classification edgeR DESeq MLSeq
updated 10.8 years ago by ★ 13k • written 10.8 years ago by ★ 1.5k
0
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0
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1.1k
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Repitools - featureScores - mappability Bsgenome object
BSgenome BSgenome Repitools BSgenome BSgenome Repitools
10.9 years ago Dario Strbenac ★ 1.5k
1
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0
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2.3k
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Answer: A: limma contrast matrix interaction effect
10.9 years ago Dario Strbenac ★ 1.5k
0
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1
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1.6k
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BigWig Import by Chromosome
updated 10.9 years ago by 25k • written 10.9 years ago by ★ 1.5k
0
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1
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3.1k
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Comment: C: Odd contrast; does it make statistical sense?
11.0 years ago Dario Strbenac ★ 1.5k
0
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1
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15k
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Answer: A: Limma design and contrast matrix question.
11.0 years ago Dario Strbenac ★ 1.5k
0
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0
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1.2k
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EBSeq Results Affected By Outlying Values
EBSeq EBSeq
11.0 years ago Dario Strbenac ★ 1.5k
0
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0
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1.7k
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Comment: C: DEXSeq - identical p-values for all exons in a gene
11.1 years ago Dario Strbenac ★ 1.5k
0
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0
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752
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Answer: A: Multi-level experiments
11.1 years ago Dario Strbenac ★ 1.5k
0
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0
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1.4k
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Answer: A: RNA-Seq fold change compared to control, without replicates
11.2 years ago Dario Strbenac ★ 1.5k
0
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0
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2.4k
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Comment: C: Graph of methylation data around TSS - Repitools or other package?
11.2 years ago Dario Strbenac ★ 1.5k
0
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1
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2.4k
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Comment: C: Graph of methylation data around TSS - Repitools or other package?
11.2 years ago Dario Strbenac ★ 1.5k
0
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1
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2.4k
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Answer: A: Graph of methylation data around TSS - Repitools or other package?
11.2 years ago Dario Strbenac ★ 1.5k
0
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0
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734
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RankProd Result for One Class Analysis
11.5 years ago Dario Strbenac ★ 1.5k
0
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1
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1.3k
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Comment: C: Annotate blastSequences Returns No Result
11.5 years ago Dario Strbenac ★ 1.5k
0
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3
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1.3k
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Annotate blastSequences Returns No Result
annotate annotate
updated 11.5 years ago by 25k • written 11.5 years ago by ★ 1.5k
0
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0
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2.8k
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Answer: A: Problem with importing bigWig file from GEO with rtracklayer?
11.5 years ago Dario Strbenac ★ 1.5k
0
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2
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4.1k
views
TranscriptDb of GENCODE Genes
Transcription Annotation Transcription Annotation
updated 11.5 years ago by ★ 7.2k • written 11.5 years ago by ★ 1.5k
281 results • Page 4 of 6
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