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Is it possible to combine count gene expression data coming from one sequencing technology (RNA seq) with intensity gene expression data coming from …
DESeq2 RNASeqData edgeR limma DifferentialExpression
updated 15 months ago by ★ 4.5k • written 15 months ago by • 0
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532
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Can a expressed gene dataset yielded after CPM be used in DESeq2 and EdgeR?
DESeq2 edgeR
updated 19 months ago by ★ 4.1k • written 19 months ago by • 0
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920
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Comment: Comment: DispEsts plot
20 months ago Sep • 0
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1
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920
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Comment: Comment: DispEsts plot
20 months ago Sep • 0
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1
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920
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Comment: Comment: DispEsts plot
20 months ago Sep • 0
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6
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920
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DispEsts plot
DESeq2
20 months ago Sep • 0
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1
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814
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Comment: Comment: Does it make sense to have so many statistically significant gene differentially
20 months ago Sep • 0
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3
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814
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Does it make sense to have so many statistically significant gene differentially expressed after DESeq2 paired sample analysis?
DESeq2
updated 20 months ago by 42k • written 20 months ago by • 0
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609
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Some questions regarding using limma and interpretation
limma
20 months ago Sep • 0
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1
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903
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Comment: Comment: Does the running time of DESeq function is much more longer for design factor co
20 months ago Sep • 0
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1
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903
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Comment: Comment: Does the running time of DESeq function is much more longer for design factor co
20 months ago Sep • 0
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7
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903
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Does the running time of DESeq function is much more longer for design factor containing two variable compare to design factor containing only one v…
DESeq2
updated 20 months ago by 42k • written 20 months ago by • 0
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1
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903
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Comment: Comment: Does the running time of DESeq function is much more longer for design factor co
20 months ago Sep • 0
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3.7k
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Comment: Comment: Is there any chance to solve "the model matrix is not full rank" in DESeq2?
20 months ago Sep • 0
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10
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3.7k
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Is there any chance to solve "the model matrix is not full rank" in DESeq2?
DESeq2
20 months ago Sep • 0
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0
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3.7k
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Comment: Comment: Is there any chance to solve "the model matrix is not full rank" in DESeq2?
20 months ago Sep • 0
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1
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3.7k
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Comment: Comment: Is there any chance to solve "the model matrix is not full rank" in DESeq2?
20 months ago Sep • 0
0
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1
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3.7k
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Comment: Comment: Is there any chance to solve "the model matrix is not full rank" in DESeq2?
20 months ago Sep • 0
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0
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3.7k
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Comment: Comment: Is there any chance to solve "the model matrix is not full rank" in DESeq2?
20 months ago Sep • 0
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2
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658
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Does DESeq2 work for investigating the gene differential expression before and after the treat but in the same sample?
DESeq2
updated 21 months ago by 42k • written 21 months ago by • 0
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2.7k
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Comment: Comment: Do the count values should be only integer to be able to use DESeq2?
22 months ago Sep • 0
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2.7k
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Do the count values should be only integer to be able to use DESeq2?
DESeq2
22 months ago Sep • 0
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