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Is it possible to combine count gene expression data coming from one sequencing technology (RNA seq) with intensity gene expression data coming from …
DESeq2 RNASeqData edgeR limma DifferentialExpression
updated 20 months ago by ★ 4.8k • written 20 months ago by • 0
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603
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Can a expressed gene dataset yielded after CPM be used in DESeq2 and EdgeR?
DESeq2 edgeR
updated 2.1 years ago by ★ 4.1k • written 2.1 years ago by • 0
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Comment: Comment: DispEsts plot
2.1 years ago Sep • 0
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1.0k
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Comment: Comment: DispEsts plot
2.1 years ago Sep • 0
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1.0k
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Comment: Comment: DispEsts plot
2.1 years ago Sep • 0
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6
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1.0k
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DispEsts plot
DESeq2
2.1 years ago Sep • 0
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1
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904
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Comment: Comment: Does it make sense to have so many statistically significant gene differentially
2.1 years ago Sep • 0
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3
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904
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Does it make sense to have so many statistically significant gene differentially expressed after DESeq2 paired sample analysis?
DESeq2
updated 2.1 years ago by 43k • written 2.1 years ago by • 0
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667
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Some questions regarding using limma and interpretation
limma
2.1 years ago Sep • 0
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1
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1.0k
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Comment: Comment: Does the running time of DESeq function is much more longer for design factor co
2.1 years ago Sep • 0
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1.0k
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Comment: Comment: Does the running time of DESeq function is much more longer for design factor co
2.1 years ago Sep • 0
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7
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1.0k
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Does the running time of DESeq function is much more longer for design factor containing two variable compare to design factor containing only one v…
DESeq2
updated 2.1 years ago by 43k • written 2.1 years ago by • 0
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1
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1.0k
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Comment: Comment: Does the running time of DESeq function is much more longer for design factor co
2.1 years ago Sep • 0
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0
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4.8k
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Comment: Comment: Is there any chance to solve "the model matrix is not full rank" in DESeq2?
2.1 years ago Sep • 0
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4.8k
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Is there any chance to solve "the model matrix is not full rank" in DESeq2?
DESeq2
2.1 years ago Sep • 0
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0
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4.8k
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Comment: Comment: Is there any chance to solve "the model matrix is not full rank" in DESeq2?
2.1 years ago Sep • 0
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1
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4.8k
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Comment: Comment: Is there any chance to solve "the model matrix is not full rank" in DESeq2?
2.1 years ago Sep • 0
0
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1
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4.8k
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Comment: Comment: Is there any chance to solve "the model matrix is not full rank" in DESeq2?
2.1 years ago Sep • 0
0
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0
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4.8k
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Comment: Comment: Is there any chance to solve "the model matrix is not full rank" in DESeq2?
2.1 years ago Sep • 0
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2
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742
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Does DESeq2 work for investigating the gene differential expression before and after the treat but in the same sample?
DESeq2
updated 2.2 years ago by 43k • written 2.2 years ago by • 0
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Comment: Comment: Do the count values should be only integer to be able to use DESeq2?
2.3 years ago Sep • 0
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3
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Do the count values should be only integer to be able to use DESeq2?
DESeq2
2.3 years ago Sep • 0
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