Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
1
vote
1
reply
1.1k
views
Answer: A: The coordinate system problem about DiffBind output
4.9 years ago Rory Stark ★ 5.2k
0
votes
1
reply
3.1k
views
Comment: C: DiffBind: dealing with replicates
4.9 years ago Rory Stark ★ 5.2k
3
votes
1
reply
1.2k
views
Answer: A: Some confuse about the DBA_SCORE_TMM_READS_EFFECTIVE_CPM in DiffBind
4.9 years ago Rory Stark ★ 5.2k
0
votes
1
reply
630
views
Answer: A: Diffbind- results different every time I run it
4.9 years ago Rory Stark ★ 5.2k
1
vote
0
replies
1.1k
views
Answer: A: DiffBind in depth explanation
4.9 years ago Rory Stark ★ 5.2k
0
votes
1
reply
3.1k
views
Comment: C: DiffBind: dealing with replicates
4.9 years ago Rory Stark ★ 5.2k
0
votes
0
replies
842
views
Answer: A: DiffBind: error with dba.peakset()
4.9 years ago Rory Stark ★ 5.2k
0
votes
0
replies
448
views
Answer: A: DiffBind 2.10.0: Consensus peaks seems to miss 2/3 of original sample peaks
4.9 years ago Rory Stark ★ 5.2k
1
vote
1
reply
3.1k
views
Answer: A: DiffBind: dealing with replicates
4.9 years ago Rory Stark ★ 5.2k
1
vote
0
replies
706
views
Answer: A: DiffBind t-statistic values
5.0 years ago Rory Stark ★ 5.2k
0
votes
0
replies
990
views
Answer: A: DiffBind MA plot annotate promoter regions with different colour
5.0 years ago Rory Stark ★ 5.2k
1
vote
0
replies
2.5k
views
Comment: C: Can I input peak files from Genrich as input reads in DiffBind?
5.0 years ago Rory Stark ★ 5.2k
0
votes
1
reply
1.9k
views
Answer: A: DiffBind handling of replicates and consensus
5.0 years ago Rory Stark ★ 5.2k
0
votes
0
replies
2.7k
views
Comment: C: DiffBind: error with dba(sampleSheet="samples.csv")
5.1 years ago Rory Stark ★ 5.2k
0
votes
0
replies
2.1k
views
Comment: C: Integrating the computed spike-in coefficients for the normalisation before diff
5.1 years ago Rory Stark ★ 5.2k
0
votes
0
replies
1.9k
views
Answer: A: Change color of Diffbind's PCA and clustered heatmap plot()
5.1 years ago Rory Stark ★ 5.2k
0
votes
0
replies
538
views
Answer: A: DiffBind PCA plot is not showing all samples from sample sheet
5.1 years ago Rory Stark ★ 5.2k
0
votes
0
replies
744
views
Answer: A: DiffBind plot size and labels
5.1 years ago Rory Stark ★ 5.2k
0
votes
0
replies
705
views
Answer: A: Diffbind GLM Design
5.2 years ago Rory Stark ★ 5.2k
0
votes
0
replies
1.9k
views
Answer: A: Change color of Diffbind's PCA and clustered heatmap plot()
5.2 years ago Rory Stark ★ 5.2k
1
vote
1
reply
2.1k
views
Answer: A: Integrating the computed spike-in coefficients for the normalisation before diff
5.2 years ago Rory Stark ★ 5.2k
3
votes
3
replies
954
views
Answer: A: DiffBind block not working for me
5.3 years ago Rory Stark ★ 5.2k
0
votes
1
reply
1.3k
views
Answer: A: How to decide on genes linked by differential binding peaks in opposite conditio
5.3 years ago Rory Stark ★ 5.2k
1
vote
1
reply
2.4k
views
Answer: A: DiffBind without replicates
5.3 years ago Rory Stark ★ 5.2k
0
votes
1
reply
2.1k
views
Answer: A: DiffBind minOverlap parameter
5.3 years ago Rory Stark ★ 5.2k
2
votes
0
replies
1.8k
views
Answer: A: Filtering counts in SummarizedExperiment
5.3 years ago Rory Stark ★ 5.2k
0
votes
0
replies
837
views
Comment: C: diffbind plotVenn by Factor
5.3 years ago Rory Stark ★ 5.2k
0
votes
0
replies
1.2k
views
Answer: A: in diffbind dba.peakset what is the meaning of minOverlap?
5.3 years ago Rory Stark ★ 5.2k
0
votes
0
replies
825
views
Answer: A: dba.count filter example in manual
5.3 years ago Rory Stark ★ 5.2k
1
vote
0
replies
1.1k
views
Answer: A: Diffbind with age as blocking factor
5.3 years ago Rory Stark ★ 5.2k
0
votes
1
reply
4.4k
views
Answer: A: Is it possible to change how DiffBind merge peaks?
5.4 years ago Rory Stark ★ 5.2k
0
votes
0
replies
777
views
Answer: A: diffbind counts as same values
5.4 years ago Rory Stark ★ 5.2k
0
votes
0
replies
945
views
Answer: A: Help with DiffBind plotVenn and referencing peak sets in general
5.4 years ago Rory Stark ★ 5.2k
1
vote
1
reply
1.2k
views
Answer: A: in diffbind dba.peakset what is the meaning of minOverlap?
5.4 years ago Rory Stark ★ 5.2k
0
votes
1
reply
837
views
Answer: A: diffbind plotVenn by Factor
5.4 years ago Rory Stark ★ 5.2k
0
votes
1
reply
1.6k
views
Answer: A: diffBind analysis: only one replicate
5.5 years ago Rory Stark ★ 5.2k
0
votes
1
reply
1.5k
views
Comment: C: diffbind dba.plotvolcano bLabels option use genames instead of numbers
5.5 years ago Rory Stark ★ 5.2k
0
votes
0
replies
1.0k
views
Answer: A: Can we change the name of the ColAttributes in the image generated by dba.plotHe
5.5 years ago Rory Stark ★ 5.2k
0
votes
0
replies
3.9k
views
Comment: C: How can I remove the row and column labels/names in the plot() or dba.plotHeatma
5.5 years ago Rory Stark ★ 5.2k
0
votes
1
reply
1.2k
views
Answer: A: Can we control colors for two different colAtributes
5.5 years ago Rory Stark ★ 5.2k
0
votes
0
replies
1.9k
views
Comment: C: diffbind dba object subset peak regions
5.5 years ago Rory Stark ★ 5.2k
0
votes
0
replies
1.7k
views
Answer: A: DiffBind dba error
5.5 years ago Rory Stark ★ 5.2k
0
votes
0
replies
1.5k
views
Answer: A: DiffBind dba.count error pv$merge(bed): attempt to apply non-function
5.5 years ago Rory Stark ★ 5.2k
0
votes
1
reply
1.5k
views
Answer: A: diffbind dba.plotvolcano bLabels option use genames instead of numbers
5.5 years ago Rory Stark ★ 5.2k
0
votes
1
reply
670
views
Answer: A: How can we increase the width of the correlation plot generated by DiffBind
5.5 years ago Rory Stark ★ 5.2k
0
votes
1
reply
1.9k
views
Answer: A: diffbind dba object subset peak regions
5.5 years ago Rory Stark ★ 5.2k
0
votes
0
replies
892
views
Answer: A: Diffbind problems with negative widths in IRanges and chromosome ranges after db
5.5 years ago Rory Stark ★ 5.2k
0
votes
1
reply
3.9k
views
Answer: A: How can I remove the row and column labels/names in the plot() or dba.plotHeatma
5.5 years ago Rory Stark ★ 5.2k
0
votes
2
replies
1.2k
views
Answer: A: Diffbind batch effect blocking error
5.5 years ago Rory Stark ★ 5.2k
1
vote
1
reply
1.4k
views
Comment: C: diffBind: differentially bound sites are highly different between using EDGER an
5.6 years ago Rory Stark ★ 5.2k
928 results • Page 9 of 19
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6