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Answer: A: The coordinate system problem about DiffBind output
5.1 years ago Rory Stark ★ 5.2k
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3.3k
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Comment: C: DiffBind: dealing with replicates
5.1 years ago Rory Stark ★ 5.2k
3
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1
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1.2k
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Answer: A: Some confuse about the DBA_SCORE_TMM_READS_EFFECTIVE_CPM in DiffBind
5.1 years ago Rory Stark ★ 5.2k
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663
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Answer: A: Diffbind- results different every time I run it
5.1 years ago Rory Stark ★ 5.2k
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0
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1.2k
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Answer: A: DiffBind in depth explanation
5.1 years ago Rory Stark ★ 5.2k
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3.3k
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Comment: C: DiffBind: dealing with replicates
5.1 years ago Rory Stark ★ 5.2k
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931
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Answer: A: DiffBind: error with dba.peakset()
5.1 years ago Rory Stark ★ 5.2k
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471
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Answer: A: DiffBind 2.10.0: Consensus peaks seems to miss 2/3 of original sample peaks
5.1 years ago Rory Stark ★ 5.2k
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3.3k
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Answer: A: DiffBind: dealing with replicates
5.1 years ago Rory Stark ★ 5.2k
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736
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Answer: A: DiffBind t-statistic values
5.1 years ago Rory Stark ★ 5.2k
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1.1k
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Answer: A: DiffBind MA plot annotate promoter regions with different colour
5.2 years ago Rory Stark ★ 5.2k
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2.6k
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Comment: C: Can I input peak files from Genrich as input reads in DiffBind?
5.2 years ago Rory Stark ★ 5.2k
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1
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2.0k
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Answer: A: DiffBind handling of replicates and consensus
5.2 years ago Rory Stark ★ 5.2k
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2.8k
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Comment: C: DiffBind: error with dba(sampleSheet="samples.csv")
5.3 years ago Rory Stark ★ 5.2k
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2.1k
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Comment: C: Integrating the computed spike-in coefficients for the normalisation before diff
5.3 years ago Rory Stark ★ 5.2k
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2.0k
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Answer: A: Change color of Diffbind's PCA and clustered heatmap plot()
5.3 years ago Rory Stark ★ 5.2k
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565
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Answer: A: DiffBind PCA plot is not showing all samples from sample sheet
5.3 years ago Rory Stark ★ 5.2k
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792
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Answer: A: DiffBind plot size and labels
5.3 years ago Rory Stark ★ 5.2k
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0
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740
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Answer: A: Diffbind GLM Design
5.4 years ago Rory Stark ★ 5.2k
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2.0k
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Answer: A: Change color of Diffbind's PCA and clustered heatmap plot()
5.4 years ago Rory Stark ★ 5.2k
1
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1
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2.1k
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Answer: A: Integrating the computed spike-in coefficients for the normalisation before diff
5.4 years ago Rory Stark ★ 5.2k
3
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3
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1.0k
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Answer: A: DiffBind block not working for me
5.5 years ago Rory Stark ★ 5.2k
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1
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1.4k
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Answer: A: How to decide on genes linked by differential binding peaks in opposite conditio
5.5 years ago Rory Stark ★ 5.2k
1
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1
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2.5k
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Answer: A: DiffBind without replicates
5.5 years ago Rory Stark ★ 5.2k
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1
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2.2k
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Answer: A: DiffBind minOverlap parameter
5.5 years ago Rory Stark ★ 5.2k
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1.9k
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Answer: A: Filtering counts in SummarizedExperiment
5.5 years ago Rory Stark ★ 5.2k
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885
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Comment: C: diffbind plotVenn by Factor
5.5 years ago Rory Stark ★ 5.2k
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1.4k
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Answer: A: in diffbind dba.peakset what is the meaning of minOverlap?
5.5 years ago Rory Stark ★ 5.2k
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0
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868
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Answer: A: dba.count filter example in manual
5.5 years ago Rory Stark ★ 5.2k
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1.1k
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Answer: A: Diffbind with age as blocking factor
5.5 years ago Rory Stark ★ 5.2k
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1
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4.7k
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Answer: A: Is it possible to change how DiffBind merge peaks?
5.6 years ago Rory Stark ★ 5.2k
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0
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814
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Answer: A: diffbind counts as same values
5.6 years ago Rory Stark ★ 5.2k
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0
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996
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Answer: A: Help with DiffBind plotVenn and referencing peak sets in general
5.6 years ago Rory Stark ★ 5.2k
1
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1
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1.4k
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Answer: A: in diffbind dba.peakset what is the meaning of minOverlap?
5.6 years ago Rory Stark ★ 5.2k
0
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1
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885
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Answer: A: diffbind plotVenn by Factor
5.6 years ago Rory Stark ★ 5.2k
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1
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1.7k
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Answer: A: diffBind analysis: only one replicate
5.7 years ago Rory Stark ★ 5.2k
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1
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1.6k
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Comment: C: diffbind dba.plotvolcano bLabels option use genames instead of numbers
5.7 years ago Rory Stark ★ 5.2k
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0
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1.0k
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Answer: A: Can we change the name of the ColAttributes in the image generated by dba.plotHe
5.7 years ago Rory Stark ★ 5.2k
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4.2k
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Comment: C: How can I remove the row and column labels/names in the plot() or dba.plotHeatma
5.7 years ago Rory Stark ★ 5.2k
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1.2k
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Answer: A: Can we control colors for two different colAtributes
5.7 years ago Rory Stark ★ 5.2k
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2.0k
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Comment: C: diffbind dba object subset peak regions
5.7 years ago Rory Stark ★ 5.2k
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1.7k
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Answer: A: DiffBind dba error
5.7 years ago Rory Stark ★ 5.2k
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1.5k
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Answer: A: DiffBind dba.count error pv$merge(bed): attempt to apply non-function
5.7 years ago Rory Stark ★ 5.2k
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1
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1.6k
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Answer: A: diffbind dba.plotvolcano bLabels option use genames instead of numbers
5.7 years ago Rory Stark ★ 5.2k
0
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1
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707
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Answer: A: How can we increase the width of the correlation plot generated by DiffBind
5.7 years ago Rory Stark ★ 5.2k
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1
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2.0k
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Answer: A: diffbind dba object subset peak regions
5.7 years ago Rory Stark ★ 5.2k
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0
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929
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Answer: A: Diffbind problems with negative widths in IRanges and chromosome ranges after db
5.7 years ago Rory Stark ★ 5.2k
0
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1
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4.2k
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Answer: A: How can I remove the row and column labels/names in the plot() or dba.plotHeatma
5.7 years ago Rory Stark ★ 5.2k
0
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2
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1.2k
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Answer: A: Diffbind batch effect blocking error
5.7 years ago Rory Stark ★ 5.2k
1
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1
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1.5k
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Comment: C: diffBind: differentially bound sites are highly different between using EDGER an
5.7 years ago Rory Stark ★ 5.2k
928 results • Page 9 of 19
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