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2
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1.4k
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Answer: Answer: Positive and negative value fold value in ATAC seq using DiffBind
2.0 years ago Rory Stark ★ 5.2k
0
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0
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823
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Answer: Answer: Plotting read densities from DiffBind results
2.0 years ago Rory Stark ★ 5.2k
0
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1
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1.1k
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Answer: Answer: Question regarding multiple comparisons in DiffBind
2.0 years ago Rory Stark ★ 5.2k
1
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0
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1.3k
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Comment: Comment: How to annotate genes from results of DiffBind
2.1 years ago Rory Stark ★ 5.2k
1
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1
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4.7k
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Comment: Comment: Help with Error in DiffBind
2.1 years ago Rory Stark ★ 5.2k
1
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1
reply
4.7k
views
Comment: Comment: Help with Error in DiffBind
2.1 years ago Rory Stark ★ 5.2k
2
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1
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4.7k
views
Answer: Answer: Help with Error in DiffBind
2.1 years ago Rory Stark ★ 5.2k
1
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0
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4.7k
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Comment: Comment: Help with Error in DiffBind
2.1 years ago Rory Stark ★ 5.2k
1
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1
reply
4.7k
views
Comment: Comment: Help with Error in DiffBind
2.1 years ago Rory Stark ★ 5.2k
0
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0
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1.3k
views
Answer: Answer: Multiple issues reading in peak sets with Diffbind
2.1 years ago Rory Stark ★ 5.2k
1
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1
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4.7k
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Comment: Comment: Help with Error in DiffBind
2.1 years ago Rory Stark ★ 5.2k
0
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1
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1.8k
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Answer: Answer: DiffBind with ChIPseq from histone analysis: EdgeR or Deseq2?
2.1 years ago Rory Stark ★ 5.2k
0
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1
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2.5k
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Comment: Comment: Does DiffBind make consensus peaks sets for samples from a given condition (e.g.
2.1 years ago Rory Stark ★ 5.2k
2
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0
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3.8k
views
Answer: Answer: DiffBind on ATAC seq data
2.1 years ago Rory Stark ★ 5.2k
1
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1
reply
4.7k
views
Answer: Answer: Help with Error in DiffBind
2.1 years ago Rory Stark ★ 5.2k
0
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2
replies
2.5k
views
Comment: Comment: Does DiffBind make consensus peaks sets for samples from a given condition (e.g.
2.1 years ago Rory Stark ★ 5.2k
0
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0
replies
951
views
Comment: Comment: Using DiffBind Normalization and Contrasting on Fold Change Values
2.1 years ago Rory Stark ★ 5.2k
0
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2
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2.5k
views
Comment: Comment: Does DiffBind make consensus peaks sets for samples from a given condition (e.g.
2.1 years ago Rory Stark ★ 5.2k
1
vote
1
reply
951
views
Answer: Answer: Using DiffBind Normalization and Contrasting on Fold Change Values
2.1 years ago Rory Stark ★ 5.2k
0
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2
replies
2.5k
views
Comment: Comment: Does DiffBind make consensus peaks sets for samples from a given condition (e.g.
2.1 years ago Rory Stark ★ 5.2k
1
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1
reply
874
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Answer: Answer: DiffBind spike-in lib.sizes confusion
2.1 years ago Rory Stark ★ 5.2k
0
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1
reply
2.5k
views
Answer: Answer: Does DiffBind make consensus peaks sets for samples from a given condition (e.g.
2.1 years ago Rory Stark ★ 5.2k
0
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0
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612
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Answer: Answer: DiffBind---peak region reads or all reads？
2.1 years ago Rory Stark ★ 5.2k
0
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0
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1.3k
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Comment: Comment: DiffBind---Normalization problem-spike in or no spike in beforehand?
2.1 years ago Rory Stark ★ 5.2k
0
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1
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3.1k
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Comment: Comment: Diffbind dba.analyze Error in d$span : $ operator is invalid for atomic vectors
2.1 years ago Rory Stark ★ 5.2k
0
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0
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1.5k
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Answer: Answer: DiffBind differential analysis
2.2 years ago Rory Stark ★ 5.2k
1
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1
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1.3k
views
Answer: Answer: DiffBind---Normalization problem-spike in or no spike in beforehand?
2.2 years ago Rory Stark ★ 5.2k
0
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0
replies
980
views
Answer: Answer: DiffBind- differentiate between new peaks and gain peaks
2.2 years ago Rory Stark ★ 5.2k
0
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0
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895
views
Answer: Answer: Setting DBA$config$mergeOverlap for Diffbind
2.2 years ago Rory Stark ★ 5.2k
0
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1
reply
1.9k
views
Comment: Comment: DiffBind:all samples have 0 counts for all genes.
2.2 years ago Rory Stark ★ 5.2k
0
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0
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771
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Answer: Answer: Diffbind (or maybe DESeq2) Fold clarification
2.2 years ago Rory Stark ★ 5.2k
0
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1
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1.6k
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Comment: Comment: Issue in generating a new DBA object with custom counts
2.3 years ago Rory Stark ★ 5.2k
0
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1
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1.7k
views
Comment: Comment: Question about Diffbind counts
2.3 years ago Rory Stark ★ 5.2k
0
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0
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1.7k
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Comment: Comment: Question about Diffbind counts
2.3 years ago Rory Stark ★ 5.2k
0
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0
replies
1.7k
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Comment: Comment: Question about Diffbind counts
2.3 years ago Rory Stark ★ 5.2k
0
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1
reply
1.7k
views
Comment: Comment: Question about Diffbind counts
2.3 years ago Rory Stark ★ 5.2k
0
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1
reply
1.6k
views
Comment: Comment: Issue in generating a new DBA object with custom counts
2.3 years ago Rory Stark ★ 5.2k
0
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0
replies
1.1k
views
Answer: Answer: Diffbind matrix/batch effect/normalization
2.3 years ago Rory Stark ★ 5.2k
0
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1
reply
1.7k
views
Comment: Comment: Question about Diffbind counts
2.3 years ago Rory Stark ★ 5.2k
1
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0
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5.0k
views
Comment: Comment: BiocParallel error with ChIPQC
2.3 years ago Rory Stark ★ 5.2k
0
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0
replies
1.2k
views
Answer: Answer: Minor issue regarding customization of text size in Volcano and Heatmap Plots
2.3 years ago Rory Stark ★ 5.2k
0
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1
reply
5.0k
views
Comment: Comment: BiocParallel error with ChIPQC
2.3 years ago Rory Stark ★ 5.2k
0
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0
replies
1.6k
views
Answer: Answer: Issue in generating a new DBA object with custom counts
2.3 years ago Rory Stark ★ 5.2k
1
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1
reply
2.6k
views
Comment: Comment: RiP RLE normalisation using spike-in peaks in DiffBind for ChIP-seq
2.3 years ago Rory Stark ★ 5.2k
2
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1
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2.6k
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Answer: Answer: RiP RLE normalisation using spike-in peaks in DiffBind for ChIP-seq
2.4 years ago Rory Stark ★ 5.2k
0
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0
replies
1.2k
views
Answer: Answer: DiffBind: Error in pv$called[, mask] : subscript out of bounds
2.4 years ago Rory Stark ★ 5.2k
0
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0
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8.0k
views
Comment: Comment: DiffBind GreyListChIP error: Error: BiocParallel errors
2.4 years ago Rory Stark ★ 5.2k
1
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1
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1.0k
views
Answer: Answer: DiffBind Loss and Gain location
2.4 years ago • updated 2.3 years ago Rory Stark ★ 5.2k
0
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1
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5.1k
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Comment: Comment: New in DiffBind 3.2: dba.plotProfile() - Peak profiles and profile heatmaps
2.4 years ago Rory Stark ★ 5.2k
0
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1
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8.0k
views
Comment: Comment: DiffBind GreyListChIP error: Error: BiocParallel errors
2.4 years ago Rory Stark ★ 5.2k
928 results • Page 2 of 19
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