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Answer: A: DiffBind question on adb.contrast
6.7 years ago Rory Stark ★ 5.2k
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1.2k
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Answer: A: DiffBind Change of Metadata once dba.counts have been called
6.7 years ago Rory Stark ★ 5.2k
1
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3.1k
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Answer: A: Counting reads in fixed width peaks with DiffBind::dba.count without re-centerin
6.7 years ago Rory Stark ★ 5.2k
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995
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Answer: A: Combine separate dba objects into the one
6.7 years ago Rory Stark ★ 5.2k
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4.5k
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Comment: C: DiffBind Analysis with more than 2 samples?
6.8 years ago Rory Stark ★ 5.2k
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2.2k
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Comment: C: How to extract overlapping and unique peaks from the Venn Diagram to a csv forma
6.8 years ago Rory Stark ★ 5.2k
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4.7k
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Comment: C: Error "if (is.na(peaks)) { : argument is of length zero " in DiffBind
6.8 years ago Rory Stark ★ 5.2k
1
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1
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3.2k
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Answer: A: Diffbind: How do I set up multiple contrasts, for example tissue type and timepo
6.8 years ago Rory Stark ★ 5.2k
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1.8k
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Answer: A: DiffBind error with dba.count
6.8 years ago Rory Stark ★ 5.2k
2
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4.7k
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Answer: A: Error "if (is.na(peaks)) { : argument is of length zero " in DiffBind
6.8 years ago Rory Stark ★ 5.2k
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2.8k
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Comment: C: DiffBind question: How to extract read counts?
6.8 years ago Rory Stark ★ 5.2k
1
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1
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3.4k
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Answer: A: Downsampling ChIP-seq BAM files with spike in normalization factor before feedin
6.9 years ago Rory Stark ★ 5.2k
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857
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Answer: A: dba.count generates less ranges than input peakset
6.9 years ago Rory Stark ★ 5.2k
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1
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1.3k
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Answer: A: Binding matrix creation DiffBind after MACS2 peak call
6.9 years ago Rory Stark ★ 5.2k
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1.8k
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Answer: A: DiffBind error with dba.count
6.9 years ago Rory Stark ★ 5.2k
0
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2
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2.2k
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Answer: A: How to extract overlapping and unique peaks from the Venn Diagram to a csv forma
6.9 years ago Rory Stark ★ 5.2k
0
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2
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2.8k
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Answer: A: DiffBind question: How to extract read counts?
6.9 years ago Rory Stark ★ 5.2k
1
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1.0k
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Answer: A: Extracting origin info from DB sites
7.0 years ago Rory Stark ★ 5.2k
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1.0k
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Answer: A: Extracting origin info from DB sites
7.0 years ago Rory Stark ★ 5.2k
1
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633
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Answer: A: heatmap of all contrasted sites
7.0 years ago Rory Stark ★ 5.2k
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1.2k
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Answer: A: DiffBind count warning
7.0 years ago Rory Stark ★ 5.2k
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1.2k
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Answer: A: error when create dba object
7.0 years ago Rory Stark ★ 5.2k
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2.6k
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Comment: C: Venn diagram using contrasts in DiffBind
7.0 years ago Rory Stark ★ 5.2k
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2.4k
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Answer: A: MAnorm output as DiffBind input.
7.1 years ago Rory Stark ★ 5.2k
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2.9k
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Answer: A: DiffBind does not run in parallel
7.1 years ago Rory Stark ★ 5.2k
0
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1
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2.9k
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Comment: C: DiffBind does not run in parallel
7.1 years ago Rory Stark ★ 5.2k
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2.3k
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Comment: C: Warnings when update DiffBind and running errors
7.1 years ago Rory Stark ★ 5.2k
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0
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1.0k
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Answer: A: Diffbind: How to compare the DBs called with and without a blocking factor
7.1 years ago Rory Stark ★ 5.2k
2
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2
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2.0k
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Answer: A: DiffBind MA plot
7.1 years ago Rory Stark ★ 5.2k
1
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1
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2.9k
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Answer: A: DiffBind does not run in parallel
7.1 years ago Rory Stark ★ 5.2k
2
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1
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1.7k
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Answer: A: DiffBind report and MA-plot DB difference
7.1 years ago Rory Stark ★ 5.2k
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1
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1.7k
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Answer: A: DiffBind report and MA-plot DB difference
7.1 years ago Rory Stark ★ 5.2k
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1
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1.6k
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Comment: C: Unexpected results in the dba.report output files
7.1 years ago Rory Stark ★ 5.2k
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1.3k
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Comment: C: How to judge DESeq2_block and EdgeR_block result
7.2 years ago Rory Stark ★ 5.2k
1
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2
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1.3k
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Answer: A: How to judge DESeq2_block and EdgeR_block result
7.2 years ago Rory Stark ★ 5.2k
1
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1
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2.3k
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Comment: C: dba.count with pre-defined regions
7.2 years ago Rory Stark ★ 5.2k
1
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1
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2.3k
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Answer: A: dba.count with pre-defined regions
7.2 years ago Rory Stark ★ 5.2k
1
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1
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2.3k
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Answer: A: dba.count with pre-defined regions
7.2 years ago Rory Stark ★ 5.2k
1
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1
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2.4k
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Answer: A: DiffBind not accessible files in Example data
7.2 years ago Rory Stark ★ 5.2k
0
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0
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1.3k
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Answer: A: DiffBind dba.peakset + bRetrieve=T gives peak scores? or raw counts?
7.2 years ago Rory Stark ★ 5.2k
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0
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1.6k
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Answer: A: How to control the size of labels on heatmaps in DiffBind
7.2 years ago Rory Stark ★ 5.2k
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0
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2.0k
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Answer: A: DiffBind remove low count intervals for differential analysis
7.2 years ago Rory Stark ★ 5.2k
0
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1
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2.7k
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Answer: A: Using HOMER called peaks in DiffBind
7.2 years ago Rory Stark ★ 5.2k
2
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1
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1.3k
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Answer: A: DiffBind Heatmap Omitting Results?
7.2 years ago Rory Stark ★ 5.2k
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4.0k
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Comment: C: What does dba.PCA in DiffBind exactly do?
7.2 years ago Rory Stark ★ 5.2k
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2
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1.5k
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Answer: A: Inconsistent peak width with DiffBind "summit" function
7.2 years ago Rory Stark ★ 5.2k
0
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1
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2.3k
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Answer: A: Warnings when update DiffBind and running errors
7.2 years ago Rory Stark ★ 5.2k
0
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0
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6.4k
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Answer: A: Calling differential peaks from ATAC-seq data using DEseq2
7.2 years ago Rory Stark ★ 5.2k
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0
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5.5k
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Answer: A: Analyzing data without replicates using DiffBind
7.2 years ago Rory Stark ★ 5.2k
0
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0
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1.3k
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Answer: A: DiffBind dba.report inconsistent output when using filter parameters
7.3 years ago Rory Stark ★ 5.2k
928 results • Page 11 of 19
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