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Comment: C: edgeR calcNormFactors for paired counts
10.4 years ago Christopher T Gregg ▴ 210
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Comment: C: edgeR calcNormFactors for paired counts
10.4 years ago Christopher T Gregg ▴ 210
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edgeR calcNormFactors for paired counts
RNASeq Normalization edgeR RNASeq Normalization edgeR
updated 10.4 years ago by ★ 7.9k • written 10.4 years ago by ▴ 210
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Comment: C: RCytoscape: object 'graph' not found error
10.8 years ago Christopher T Gregg ▴ 210
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Comment: C: RCytoscape: object 'graph' not found error
10.8 years ago Christopher T Gregg ▴ 210
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4
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RCytoscape: object 'graph' not found error
graph RCytoscape graph RCytoscape
updated 10.8 years ago by ▴ 470 • written 10.8 years ago by ▴ 210
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looking for tools to study additive expression effects in gene pathways/networks
Pathways Rgraphviz KEGGgraph Pathways Rgraphviz KEGGgraph
11.4 years ago Christopher T Gregg ▴ 210
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3.2k
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GViz trouble retreiving X chromosome data with BiomartGeneRegionTrack
biomaRt Gviz biomaRt Gviz
updated 11.5 years ago by ▴ 750 • written 11.5 years ago by ▴ 210
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Comment: C: biomaRt access for NCBIM37 build of mouse genome
11.6 years ago Christopher T Gregg ▴ 210
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2
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2.1k
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biomaRt access for NCBIM37 build of mouse genome
biomaRt biomaRt
updated 11.6 years ago by ▴ 400 • written 11.6 years ago by ▴ 210
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1000
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biomaRt error
SNP biomaRt SNP biomaRt
11.7 years ago Christopher T Gregg ▴ 210
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3
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7.9k
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edgeR logFC
updated 11.7 years ago by 51k • written 11.7 years ago by ▴ 210
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Comment: C: edgeR logFC
11.7 years ago Christopher T Gregg ▴ 210
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1.5k
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design model EdgeR
edgeR edgeR
updated 12.3 years ago by 51k • written 12.3 years ago by ▴ 210
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1.0k
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DESeq error with glm.fit during estimateDispersions
DESeq DESeq
updated 12.4 years ago by ★ 3.8k • written 12.4 years ago by ▴ 210
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1.4k
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DESeq problems with plotDispEst using pooled-CR
updated 12.5 years ago by ★ 13k • written 12.5 years ago by ▴ 210
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2
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922
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Updating Package Versions from SVN
DESeq DESeq
updated 12.5 years ago by 67k • written 12.5 years ago by ▴ 210
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Comment: C: how to get a list of the genes in each module in WGCNA
12.7 years ago Christopher T Gregg ▴ 210
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835
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Answer: A: goseq problem
12.9 years ago Christopher T Gregg ▴ 210
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goseq problem
12.9 years ago Christopher T Gregg ▴ 210
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2
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1.5k
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Using Rscript to run DEXSeq on Linux cluster
DEXSeq DEXSeq
updated 12.9 years ago by ★ 13k • written 12.9 years ago by ▴ 210
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