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Comment: C: some errors in cytofWorkflow2 description
6.2 years ago Mark Robinson ▴ 880
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Answer: A: edgeR: Problem with subsetting a DGEList in latest package version
10.4 years ago Mark Robinson ▴ 880
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Comment: C: "True" normalization factors in edgeR
10.4 years ago Mark Robinson ▴ 880
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Answer: A: "True" normalization factors in edgeR
10.4 years ago Mark Robinson ▴ 880
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Answer: A: "True" normalization factors in edgeR
10.4 years ago Mark Robinson ▴ 880
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Comment: C: total count filter cutoff
10.7 years ago Mark Robinson ▴ 880
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Comment: C: tagwise parameters for negative binomial distribution in edgeR
10.8 years ago Mark Robinson ▴ 880
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Answer: A: differential expression- edgeR
11.0 years ago Mark Robinson ▴ 880
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Answer: A: differential expression- edgeR
11.0 years ago Mark Robinson ▴ 880
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Answer: A: edgeR glmFit
11.0 years ago Mark Robinson ▴ 880
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Answer: A: edgeR glmFit
11.0 years ago Mark Robinson ▴ 880
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Answer: A: calcNormFactors gives NaN normalization values- Please Help!
11.0 years ago Mark Robinson ▴ 880
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Answer: A: edgeR glmFit
11.0 years ago Mark Robinson ▴ 880
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Answer: A: edgeR DGEList
11.0 years ago Mark Robinson ▴ 880
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8.7k
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Answer: A: edgeR DGEList
11.0 years ago Mark Robinson ▴ 880
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4.1k
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Answer: A: edgeR - 3-dimensional Multidimensional scaling
11.1 years ago Mark Robinson ▴ 880
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2.7k
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Answer: A: confused with edgeR: multiple groups vs one control
11.1 years ago Mark Robinson ▴ 880
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Answer: A: Too many DEG with edgeR output?
11.2 years ago Mark Robinson ▴ 880
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Answer: A: Bioconductor: CPM and log(CPM) values in EdgeR does not match
11.4 years ago Mark Robinson ▴ 880
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2.4k
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Answer: A: edgeR dispersion value
11.5 years ago Mark Robinson ▴ 880
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1.8k
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Answer: A: edgeR: very low p-value and very high variance within the group of replicates
11.5 years ago Mark Robinson ▴ 880
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2.1k
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Answer: A: edgeR - one way ANOVA, coef parameter interpretation in glmLRT()
11.5 years ago Mark Robinson ▴ 880
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1.5k
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Answer: A: Problems with edgeR package
11.6 years ago Mark Robinson ▴ 880
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Answer: A: EdgeR questions about exactTest and plotMDS function
11.6 years ago Mark Robinson ▴ 880
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2.0k
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Comment: C: error with retrieving dn and ds using biomart
11.8 years ago Mark Robinson ▴ 880
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1.5k
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Answer: A: edgeR Warings
11.8 years ago Mark Robinson ▴ 880
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Answer: A: edgeR: counts or pseudo.counts?
11.8 years ago Mark Robinson ▴ 880
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3.0k
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Answer: A: TMM Normalization without replicate
11.9 years ago Mark Robinson ▴ 880
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Answer: A: edgeR continuous variables
12.0 years ago Mark Robinson ▴ 880
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1.0k
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Answer: A: EdgeR :column sums of counts or library size?
12.1 years ago Mark Robinson ▴ 880
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4.7k
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Answer: A: edgeR/DESeq for ChIP-seq analysis
12.1 years ago Mark Robinson ▴ 880
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4.5k
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Answer: A: Is there any prejudice whether to use edgeR or DESeq for differential expression
12.1 years ago Mark Robinson ▴ 880
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Answer: A: DGEList and exactTest function in edgeR package
12.1 years ago Mark Robinson ▴ 880
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2.7k
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Answer: A: Using edgeR with no replicates, estimating dispersion and the pseudo.alt slot
12.2 years ago Mark Robinson ▴ 880
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951
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Answer: A: minimal number of features tested in edgeR
12.2 years ago Mark Robinson ▴ 880
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Comment: C: Data filtering
12.2 years ago Mark Robinson ▴ 880
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Comment: C: EdgeR for proteomics
12.2 years ago Mark Robinson ▴ 880
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Postdoc in Statistical Bioinformatics, Zurich, Switzerland
Sequencing ASSET Sequencing ASSET
12.2 years ago Mark Robinson ▴ 880
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Answer: A: Fisher Information Matrix in edgeR
12.2 years ago Mark Robinson ▴ 880
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10k
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Answer: A: How can I get the normalized read counts from TMM?
12.2 years ago Mark Robinson ▴ 880
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2.1k
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Answer: A: EdgeR for proteomics
12.2 years ago Mark Robinson ▴ 880
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1.8k
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Answer: A: Data filtering
12.2 years ago Mark Robinson ▴ 880
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1.3k
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Answer: A: EdgeR condition-specific dispersion
12.2 years ago Mark Robinson ▴ 880
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1.1k
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Answer: A: how to get normalized matrix
12.2 years ago Mark Robinson ▴ 880
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1.1k
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Answer: A: edgeR - no sequences are differentially expressed
12.2 years ago Mark Robinson ▴ 880
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950
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Euro Bioc Devel 2012 Zurich CH -- Dec 13-14 2012 -- registration open
12.3 years ago Mark Robinson ▴ 880
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Answer: A: Is normalization in edgeR required for small RNA sequencing data?
12.3 years ago Mark Robinson ▴ 880
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2.6k
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counting RNA-seq reads in R/BioC
GO Infrastructure Rsubread easyRNASeq GO Infrastructure Rsubread easyRNASeq
updated 12.3 years ago by ★ 6.8k • written 12.3 years ago by ▴ 880
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1.9k
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Answer: A: Differential expression without replicates
12.3 years ago Mark Robinson ▴ 880
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1
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1.9k
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Comment: C: RNA-seq data simulation
12.3 years ago Mark Robinson ▴ 880
85 results • Page 1 of 2
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