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Comment: More regions in union when increasing DBA$config$mergeOverlap
10 days ago
Ian D.
▴ 70
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Comment: More regions in union when increasing DBA$config$mergeOverlap
5 weeks ago
Ian D.
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Comment: More regions in union when increasing DBA$config$mergeOverlap
7 weeks ago
Ian D.
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How to create consensus peak sets for each group to use in DiffBind?
DiffBind
8 weeks ago
Ian D.
▴ 70
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4
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570
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Comment:
Comment: More regions in union when increasing DBA$config$mergeOverlap
8 weeks ago
Ian D.
▴ 70
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More regions in union when increasing DBA$config$mergeOverlap
DiffBind
8 weeks ago • updated 10 days ago
Ian D.
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902
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DESeq - ChIP-seq (including background reads)
DESeq
DESeq
updated 12.4 years ago by
Gordon Brown
▴ 70 • written 12.4 years ago by
Ian D.
▴ 70
0
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1
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815
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htSeqTools - filtered reads > BED?
IRanges
htSeqTools
IRanges
htSeqTools
updated 12.4 years ago by
Michael Lawrence
★ 11k • written 12.4 years ago by
Ian D.
▴ 70
0
votes
2
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1.2k
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htSeqTools - naming RangedData objects?
htSeqTools
ASSIGN
htSeqTools
ASSIGN
updated 12.5 years ago by
Michael Lawrence
★ 11k • written 12.5 years ago by
Ian D.
▴ 70
0
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0
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1.4k
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Comment:
C: Using DESeq with ChIP-seq data - all or non-redundant reads?
12.7 years ago
Ian D.
▴ 70
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3
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1.4k
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Using DESeq with ChIP-seq data - all or non-redundant reads?
DESeq
DESeq
updated 12.7 years ago by
Ivan Gregoretti
▴ 310 • written 12.7 years ago by
Ian D.
▴ 70
0
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1
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2.4k
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Comment:
C: Using DESeq with ChIP-seq data
13.0 years ago
Ian D.
▴ 70
0
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4
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2.4k
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Using DESeq with ChIP-seq data
DESeq
DESeq
updated 13.0 years ago by
Simon Anders
★ 3.7k • written 13.0 years ago by
Ian D.
▴ 70
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