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Comment: Comment: Warning message when running limma with covariates
6 months ago Chris ▴ 20
3
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3
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515
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Warning message when running limma with covariates
limma
updated 6 months ago by 52k • written 6 months ago by ▴ 20
0
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0
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735
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Comment: Comment: Limma with covariates
6 months ago Chris ▴ 20
0
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1
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735
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Comment: Comment: Limma with covariates
6 months ago Chris ▴ 20
5
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4
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735
views
Limma with covariates
limma
6 months ago Chris ▴ 20
0
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0
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1.1k
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Comment: Comment: Method to find pathways different between 2 groups
7 months ago Chris ▴ 20
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0
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2.0k
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Comment: Comment: EGSEA usage with microarray data (with vooma)?
7 months ago Chris ▴ 20
0
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0
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690
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Comment: Comment: Help with running egsea()
7 months ago Chris ▴ 20
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1
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690
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Comment: Comment: Help with running egsea()
7 months ago Chris ▴ 20
3
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5
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690
views
Help with running egsea()
EGSEA
7 months ago Chris ▴ 20
4
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5
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1.1k
views
Method to find pathways different between 2 groups
fgsea GSVA CAMERA
7 months ago Chris ▴ 20
0
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1
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1.1k
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Comment: Comment: Method to find pathways different between 2 groups
7 months ago Chris ▴ 20
0
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0
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930
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Comment: Comment: fgsea significant result
7 months ago Chris ▴ 20
2
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2
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930
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fgsea significant result
fgsea
7 months ago Chris ▴ 20
0
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0
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316
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Empty table plot using plotGseaTable()
fgsea
7 months ago Chris ▴ 20
0
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0
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593
views
Comment: Comment: Help with error using camera() in limma
7 months ago Chris ▴ 20
0
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1
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593
views
Comment: Comment: Help with error using camera() in limma
7 months ago Chris ▴ 20
3
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4
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593
views
Help with error using camera() in limma
CAMERA limma
7 months ago Chris ▴ 20
0
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0
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3.3k
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Comment: Comment: The difference when using Limma compare between 3 conditions vs 2 conditions
7 months ago Chris ▴ 20
0
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0
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2.2k
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Comment: Comment: Why p value inconsistent when using different number of pathway score?
7 months ago Chris ▴ 20
0
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0
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790
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Comment: Comment: Perform gene set enrichment analysis using fgsea on two conditions that don't ha
7 months ago Chris ▴ 20
2
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2
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790
views
Perform gene set enrichment analysis using fgsea on two conditions that don't have differential express genes
fgsea
7 months ago Chris ▴ 20
0
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0
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2.2k
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Comment: Comment: Why p value inconsistent when using different number of pathway score?
7 months ago Chris ▴ 20
0
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0
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350
views
Could we detect difference at pathway level but not significant different at gene level?
GSVA
7 months ago Chris ▴ 20
0
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1
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2.2k
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Comment: Comment: Why p value inconsistent when using different number of pathway score?
7 months ago Chris ▴ 20
0
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1
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2.2k
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Comment: Comment: Why p value inconsistent when using different number of pathway score?
8 months ago Chris ▴ 20
0
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1
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2.2k
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Comment: Comment: Why p value inconsistent when using different number of pathway score?
8 months ago Chris ▴ 20
0
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1
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2.2k
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Comment: Comment: Why p value inconsistent when using different number of pathway score?
8 months ago Chris ▴ 20
15
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17
replies
2.2k
views
Why p value inconsistent when using different number of pathway score?
limma
8 months ago • updated 7 months ago Chris ▴ 20
0
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1
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2.2k
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Comment: Comment: Why p value inconsistent when using different number of pathway score?
8 months ago Chris ▴ 20
0
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1
reply
2.2k
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Comment: Comment: Why p value inconsistent when using different number of pathway score?
8 months ago Chris ▴ 20
0
votes
0
replies
3.3k
views
Comment: Comment: The difference when using Limma compare between 3 conditions vs 2 conditions
8 months ago Chris ▴ 20
0
votes
1
reply
3.3k
views
Comment: Comment: The difference when using Limma compare between 3 conditions vs 2 conditions
8 months ago Chris ▴ 20
0
votes
0
replies
1.5k
views
Comment: Comment: Light difference when using coef vs omit a group when compare 3 groups.
8 months ago Chris ▴ 20
0
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1
reply
1.5k
views
Comment: Comment: Light difference when using coef vs omit a group when compare 3 groups.
8 months ago Chris ▴ 20
0
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1
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1.5k
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Comment: Comment: Light difference when using coef vs omit a group when compare 3 groups.
8 months ago Chris ▴ 20
0
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0
replies
1.5k
views
Comment: Comment: Light difference when using coef vs omit a group when compare 3 groups.
8 months ago Chris ▴ 20
0
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1
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1.5k
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Comment: Comment: Light difference when using coef vs omit a group when compare 3 groups.
8 months ago Chris ▴ 20
5
votes
9
replies
1.5k
views
Light difference when using coef vs omit a group when compare 3 groups.
limma
8 months ago Chris ▴ 20
0
votes
0
replies
2.1k
views
Comment: Comment: How to make boxplot with pairwise and overall p value from Limma
8 months ago Chris ▴ 20
0
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0
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2.1k
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Comment: Comment: How to make boxplot with pairwise and overall p value from Limma
8 months ago Chris ▴ 20
0
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1
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2.1k
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Comment: Comment: How to make boxplot with pairwise and overall p value from Limma
8 months ago Chris ▴ 20
2
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6
replies
2.1k
views
How to make boxplot with pairwise and overall p value from Limma
t.test boxplot limma anova
8 months ago Chris ▴ 20
0
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0
replies
3.3k
views
Comment: Comment: The difference when using Limma compare between 3 conditions vs 2 conditions
8 months ago Chris ▴ 20
0
votes
2
replies
3.3k
views
Comment: Comment: The difference when using Limma compare between 3 conditions vs 2 conditions
8 months ago Chris ▴ 20
0
votes
1
reply
3.3k
views
Comment: Comment: The difference when using Limma compare between 3 conditions vs 2 conditions
8 months ago Chris ▴ 20
0
votes
1
reply
3.3k
views
Comment: Comment: The difference when using Limma compare between 3 conditions vs 2 conditions
8 months ago Chris ▴ 20
0
votes
1
reply
3.3k
views
Comment: Comment: The difference when using Limma compare between 3 conditions vs 2 conditions
8 months ago Chris ▴ 20
0
votes
1
reply
3.3k
views
Comment: Comment: The difference when using Limma compare between 3 conditions vs 2 conditions
8 months ago Chris ▴ 20
0
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1
reply
3.3k
views
Comment: Comment: The difference when using Limma compare between 3 conditions vs 2 conditions
8 months ago Chris ▴ 20
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