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Comment: Comment: DESeq2 - interactions when using factors concatenated into group
6 months ago boczniak767 ▴ 740
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1
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923
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Comment: Comment: DESeq2 - interactions when using factors concatenated into group
6 months ago boczniak767 ▴ 740
1
vote
4
replies
923
views
DESeq2 - interactions when using factors concatenated into group
DESeq2
6 months ago boczniak767 ▴ 740
0
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0
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1.1k
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Comment: Comment: Size factor normalized counts for between sample comparisons - correct?
7 months ago boczniak767 ▴ 740
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1
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1.1k
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Comment: Comment: Size factor normalized counts for between sample comparisons - correct?
7 months ago boczniak767 ▴ 740
0
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1
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1.1k
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Comment: Comment: Size factor normalized counts for between sample comparisons - correct?
7 months ago boczniak767 ▴ 740
4
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11
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1.1k
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Size factor normalized counts for between sample comparisons - correct?
DESeq2
8 months ago • updated 7 months ago boczniak767 ▴ 740
0
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0
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1.1k
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Comment: Comment: Size factor normalized counts for between sample comparisons - correct?
8 months ago boczniak767 ▴ 740
0
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0
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1.1k
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Comment: Comment: Size factor normalized counts for between sample comparisons - correct?
8 months ago boczniak767 ▴ 740
0
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1
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1.1k
views
Comment: Comment: Size factor normalized counts for between sample comparisons - correct?
8 months ago boczniak767 ▴ 740
1
vote
1
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490
views
LRT, pairwise comparisons and p-value adjustment
DESeq2
updated 11 months ago by 68k • written 11 months ago by ▴ 740
0
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0
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936
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Comment: Comment: Slightly different count plots from R and spreadsheet
11 months ago boczniak767 ▴ 740
0
votes
1
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936
views
Comment: Comment: Slightly different count plots from R and spreadsheet
11 months ago boczniak767 ▴ 740
0
votes
1
reply
936
views
Comment: Comment: Slightly different count plots from R and spreadsheet
11 months ago boczniak767 ▴ 740
1
vote
8
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936
views
Slightly different count plots from R and spreadsheet
DESeq2 ggplot2
11 months ago boczniak767 ▴ 740
0
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0
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936
views
Comment: Comment: Slightly different count plots from R and spreadsheet
11 months ago boczniak767 ▴ 740
0
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1
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852
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Comment: Comment: LRT, more than two conditions and pairwise comparisons
11 months ago boczniak767 ▴ 740
1
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3
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852
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LRT, more than two conditions and pairwise comparisons
DESeq2
updated 11 months ago by 68k • written 11 months ago by ▴ 740
0
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0
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1.5k
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Comment: Comment: WGCNA soft thresholding suggesting a power of 1
14 months ago boczniak767 ▴ 740
0
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1
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842
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Comment: Comment: vst transformation and zero counts
14 months ago boczniak767 ▴ 740
0
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1
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842
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Comment: Comment: vst transformation and zero counts
14 months ago boczniak767 ▴ 740
1
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5
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842
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vst transformation and zero counts
DESeq2
updated 14 months ago by ★ 4.8k • written 14 months ago by ▴ 740
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0
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1.5k
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Comment: Comment: Average biological replicates in RNA-seq
14 months ago boczniak767 ▴ 740
0
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1
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1.5k
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Comment: Comment: Average biological replicates in RNA-seq
14 months ago boczniak767 ▴ 740
0
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1
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1.5k
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Comment: Comment: Average biological replicates in RNA-seq
14 months ago boczniak767 ▴ 740
3
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6
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1.5k
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Average biological replicates in RNA-seq
Mfuzz RNASeq
14 months ago boczniak767 ▴ 740
0
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0
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977
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Comment: Comment: goseq, warning and strange plot from nullp
14 months ago boczniak767 ▴ 740
0
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1
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977
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Comment: Comment: goseq, warning and strange plot from nullp
14 months ago boczniak767 ▴ 740
1
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4
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977
views
goseq, warning and strange plot from nullp
goseq
15 months ago • updated 14 months ago boczniak767 ▴ 740
0
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0
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3.1k
views
Comment: Comment: Time-course, comparison of two groups
2.1 years ago boczniak767 ▴ 740
0
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1
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3.1k
views
Comment: Comment: Time-course, comparison of two groups
2.1 years ago boczniak767 ▴ 740
0
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0
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3.1k
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Comment: Comment: Time-course, comparison of two groups
2.1 years ago boczniak767 ▴ 740
0
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0
replies
3.1k
views
Comment: Comment: Time-course, comparison of two groups
2.1 years ago boczniak767 ▴ 740
0
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1
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3.1k
views
Comment: Comment: Time-course, comparison of two groups
2.1 years ago boczniak767 ▴ 740
0
votes
0
replies
663
views
Plot profiles for each group - spline analysis in edgeR
timecoursedata edgeR
updated 2.1 years ago by 52k • written 2.1 years ago by ▴ 740
0
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1
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3.1k
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Comment: Comment: Time-course, comparison of two groups
2.1 years ago boczniak767 ▴ 740
0
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1
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3.1k
views
Comment: Comment: Time-course, comparison of two groups
2.1 years ago boczniak767 ▴ 740
0
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2
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3.1k
views
Comment: Comment: Time-course, comparison of two groups
2.1 years ago boczniak767 ▴ 740
0
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1
reply
3.1k
views
Comment: Comment: Time-course, comparison of two groups
2.1 years ago boczniak767 ▴ 740
0
votes
1
reply
3.1k
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Comment: Comment: Time-course, comparison of two groups
2.1 years ago boczniak767 ▴ 740
0
votes
1
reply
3.1k
views
Comment: Comment: Time-course, comparison of two groups
2.1 years ago boczniak767 ▴ 740
3
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20
replies
3.1k
views
Time-course, comparison of two groups
edgeR
2.1 years ago boczniak767 ▴ 740
0
votes
1
reply
509
views
Time-course for three-factor design
DESeq2
updated 2.1 years ago by 43k • written 2.1 years ago by ▴ 740
0
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0
replies
1.1k
views
Loading eSet.r objects from ArrayExpress
11.5 years ago boczniak767 ▴ 740
0
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0
replies
820
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does contamination bother the normalization in transcriptome analysis
Normalization Normalization
11.9 years ago boczniak767 ▴ 740
0
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1
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2.2k
views
Comment: C: XML package - 500 internal server error
12.0 years ago boczniak767 ▴ 740
0
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0
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2.2k
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Comment: C: XML package - 500 internal server error
12.0 years ago boczniak767 ▴ 740
0
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5
replies
2.2k
views
XML package - 500 internal server error
GEOquery ArrayExpress GEOquery ArrayExpress
updated 12.0 years ago by 21k • written 12.0 years ago by ▴ 740
0
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0
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1.6k
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Answer: A: Limma/Affy - Include expression Intensity in Final 'decideTests' results
12.0 years ago boczniak767 ▴ 740
0
votes
2
replies
1.7k
views
Answer: A: Fwd: problem with reading gpr files
12.1 years ago boczniak767 ▴ 740
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