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Answer: A: error in hclust function
12.6 years ago James F. Reid ▴ 610
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14k
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Answer: A: error under "hclust" for expression data
12.6 years ago James F. Reid ▴ 610
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932
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Answer: A: all miRNAs related to a specific keyword, such as glioblastoma
12.7 years ago James F. Reid ▴ 610
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1.5k
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Comment: C: eset from GEOqury pkg
12.8 years ago James F. Reid ▴ 610
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1
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1.5k
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Answer: A: eset from GEOqury pkg
12.8 years ago James F. Reid ▴ 610
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1.4k
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Answer: A: Difficulty in AnnotatedDataFrame
12.8 years ago James F. Reid ▴ 610
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1.4k
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Answer: A: Difficulty in AnnotatedDataFrame
12.8 years ago James F. Reid ▴ 610
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1
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781
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Biobase typo in example of AnnotatedDataFrame man page
updated 12.8 years ago by 25k • written 12.8 years ago by ▴ 610
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1.1k
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Answer: A: getGEO error?
12.8 years ago James F. Reid ▴ 610
1
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2.5k
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Answer: A: miRNA- KEGG
12.8 years ago James F. Reid ▴ 610
0
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4.5k
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Answer: A: a problem in reading in cel files
12.9 years ago James F. Reid ▴ 610
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5.7k
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Answer: A: How to extract Phenotype data from GSE
13.1 years ago James F. Reid ▴ 610
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2.9k
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Answer: A: package/function for median center & unit variance
13.5 years ago James F. Reid ▴ 610
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1
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1.3k
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Answer: A: Bug in hyperGTest for KEGGHyperGParams?
13.5 years ago James F. Reid ▴ 610
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1
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1.2k
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Answer: A: illumina beadarray GEO files
13.5 years ago James F. Reid ▴ 610
0
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5.1k
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Comment: C: CEL files not valid?
13.5 years ago James F. Reid ▴ 610
0
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0
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918
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Comment: C: How to quikly know whether two genes are in the same pathway or not?
13.6 years ago James F. Reid ▴ 610
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0
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1.9k
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Answer: A: How to extract Phenotype data from GSE
13.6 years ago James F. Reid ▴ 610
0
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0
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1.9k
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Comment: C: microRNA hg build?
13.6 years ago James F. Reid ▴ 610
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1
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1.9k
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Comment: C: microRNA hg build?
13.6 years ago James F. Reid ▴ 610
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1.4k
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Answer: A: gene SOX6 in HT HG-U133A
13.6 years ago James F. Reid ▴ 610
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1
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2.3k
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Comment: C: GoStats and microRNA pipeline using Biomart
13.7 years ago James F. Reid ▴ 610
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1
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2.3k
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Comment: C: GoStats and microRNA pipeline using Biomart
13.7 years ago James F. Reid ▴ 610
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1.9k
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Comment: C: How do I parse HTML table using RCurl?
13.8 years ago James F. Reid ▴ 610
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1
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1.9k
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Answer: A: How do I parse HTML table using RCurl?
13.8 years ago James F. Reid ▴ 610
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1
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2.6k
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Answer: A: arrayQualityMetrics error
13.9 years ago James F. Reid ▴ 610
0
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1
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1.6k
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Comment: C: Time course experiment....
13.9 years ago James F. Reid ▴ 610
0
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1
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1.6k
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GEOquery GSElimits
GEOquery GEOquery
updated 14.0 years ago by 21k • written 14.0 years ago by ▴ 610
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624
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obtain a list of possible oncogenes from the annotation packages?
14.1 years ago James F. Reid ▴ 610
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0
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2.0k
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Answer: A: arrayQualityMetrics not producing all diagnostic plots
14.2 years ago James F. Reid ▴ 610
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10
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2.0k
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arrayQualityMetrics not producing all diagnostic plots
arrayQualityMetrics arrayQualityMetrics
14.2 years ago James F. Reid ▴ 610
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2
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2.0k
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Comment: C: arrayQualityMetrics not producing all diagnostic plots
14.2 years ago James F. Reid ▴ 610
0
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1
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2.0k
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Comment: C: arrayQualityMetrics not producing all diagnostic plots
14.2 years ago James F. Reid ▴ 610
0
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1
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2.0k
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Comment: C: arrayQualityMetrics not producing all diagnostic plots
14.2 years ago James F. Reid ▴ 610
0
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0
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1.4k
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Answer: A: Retrieving MAQC data from GEO using GEOquery
14.5 years ago James F. Reid ▴ 610
0
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0
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1.0k
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Answer: A: targetscan
14.5 years ago James F. Reid ▴ 610
0
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0
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1.5k
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Answer: A: Error in lm.fit(design, t(M)) from GEO dataset
14.6 years ago James F. Reid ▴ 610
0
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1
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2.4k
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Comment: C: Mapping NCBI accession numbers to GO terms
14.6 years ago James F. Reid ▴ 610
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0
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1.4k
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Answer: A: GEOquery, GSE, and MAList
14.6 years ago James F. Reid ▴ 610
0
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1
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1.0k
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GOstats/Category hyperGTest gene universe problem
Annotation Pathways GO Annotation Pathways GO
updated 14.6 years ago by ★ 7.2k • written 14.6 years ago by ▴ 610
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0
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1.7k
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Comment: C: Reg: PCA in bioconductor
14.7 years ago James F. Reid ▴ 610
0
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0
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1.2k
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Answer: A: filtering in GSEABase package
14.7 years ago James F. Reid ▴ 610
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0
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1.2k
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Answer: A: Is there anyway to map a set of EST id's to genBank accessions?
14.9 years ago James F. Reid ▴ 610
0
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0
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1.0k
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Answer: A: what is good book to learn Next Gen. Seq. analysis?
14.9 years ago James F. Reid ▴ 610
0
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0
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1.2k
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Answer: A: extracting all GO terms from GOHyperGResult object?
14.9 years ago James F. Reid ▴ 610
0
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0
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1.7k
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Answer: A: problem connecting to bioMart - NOT proxy error
15.1 years ago James F. Reid ▴ 610
0
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1
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1.2k
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building an annotation library from scratch
miRNA Annotation Organism db0 AnnotationDbi microRNA miRNA Annotation Organism db0
updated 15.1 years ago by ★ 7.2k • written 15.1 years ago by ▴ 610
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2.0k
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Comment: C: error while using genefilter's nsFilter: could not find function "hgug4112a.db_d
15.2 years ago James F. Reid ▴ 610
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0
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954
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Answer: A: automatically loading of annotation package
15.3 years ago James F. Reid ▴ 610
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0
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1.9k
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Comment: C: How to use GEOquery to extract more than the default information from a GSE
15.4 years ago James F. Reid ▴ 610
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