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How many biological replicates might suffice with Cox-Reid estimation in DESeq2 (or edgeR)?
updated 11.5 years ago by 43k • written 11.5 years ago by ▴ 420
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3
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3.0k
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Analyzing technical replicates with DESeq2
Normalization DESeq2 Normalization DESeq2
updated 11.6 years ago by ★ 7.9k • written 11.6 years ago by ▴ 420
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1
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2.4k
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Comment: C: Interpreting DESeq2 results
11.6 years ago Michael Muratet ▴ 420
0
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4
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2.4k
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Interpreting DESeq2 results
updated 11.6 years ago by 43k • written 11.6 years ago by ▴ 420
0
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2
replies
1.9k
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Interpreting DESeq2 results
updated 11.7 years ago by 43k • written 11.7 years ago by ▴ 420
0
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1
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2.3k
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Comment: C: Multifactor analysis with deseq
11.7 years ago Michael Muratet ▴ 420
0
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10
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2.3k
views
Multifactor analysis with deseq
Normalization DESeq DESeq2 Normalization DESeq DESeq2
updated 11.7 years ago by ★ 3.8k • written 11.7 years ago by ▴ 420
0
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1
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2.3k
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Comment: C: Multifactor analysis with deseq
11.7 years ago Michael Muratet ▴ 420
1
vote
3
replies
4.8k
views
Selecting elements in GRanges object by element metadata
updated 12.4 years ago by ★ 11k • written 12.4 years ago by ▴ 420
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0
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4.8k
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Comment: C: Selecting elements in GRanges object by element metadata
12.4 years ago Michael Muratet ▴ 420
0
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1
reply
953
views
Problems with ggbio
GO GO
updated 12.4 years ago by ★ 11k • written 12.4 years ago by ▴ 420
0
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1
reply
1.5k
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Comment: C: useDevel() not working
12.5 years ago Michael Muratet ▴ 420
0
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3
replies
1.5k
views
useDevel() not working
BiocInstaller BiocInstaller
updated 12.5 years ago by 21k • written 12.5 years ago by ▴ 420
0
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1
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1.4k
views
Answer: A: distanceToNearest for GRanges?
12.6 years ago Michael Muratet ▴ 420
0
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3
replies
2.2k
views
RNAseq expression analysis using DESeq: technical replicates, paired samples
RNASeq DESeq RNASeq DESeq
updated 13.1 years ago by ★ 3.8k • written 13.1 years ago by ▴ 420
0
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1
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2.2k
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Comment: C: RNAseq expression analysis using DESeq: technical replicates, paired samples
13.1 years ago Michael Muratet ▴ 420
0
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0
replies
906
views
Comment: C: F values from topTable with coef=NULL testing all zero or all equal?
13.1 years ago Michael Muratet ▴ 420
0
votes
0
replies
659
views
Fwd: F values from topTable with coef=NULL testing all zero or all equal?
13.1 years ago Michael Muratet ▴ 420
0
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2
replies
906
views
F values from topTable with coef=NULL testing all zero or all equal?
updated 13.1 years ago by 67k • written 13.1 years ago by ▴ 420
0
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0
replies
939
views
Calculating average expression value in limma topTable output
14.0 years ago Michael Muratet ▴ 420
0
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0
replies
746
views
What's the meaning of the 'trace' function in heatmap.2?
14.1 years ago Michael Muratet ▴ 420
0
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2
replies
1.3k
views
Comment: C: Help on experiment design
14.3 years ago Michael Muratet ▴ 420
0
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0
replies
637
views
Creating a custom chromLocation object for cPlot
GO GO
14.3 years ago Michael Muratet ▴ 420
0
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0
replies
849
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Bug in SLqPCR:geomMean?
SLqPCR SLqPCR
14.5 years ago Michael Muratet ▴ 420
0
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0
replies
2.1k
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Comment: C: htqPCR question
14.6 years ago Michael Muratet ▴ 420
0
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0
replies
2.1k
views
Comment: C: htqPCR question
14.6 years ago Michael Muratet ▴ 420
0
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0
replies
2.1k
views
Comment: C: htqPCR question
14.6 years ago Michael Muratet ▴ 420
0
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1
reply
2.1k
views
Comment: C: htqPCR question
14.6 years ago Michael Muratet ▴ 420
0
votes
1
reply
2.1k
views
Comment: C: htqPCR question
14.6 years ago Michael Muratet ▴ 420
0
votes
1
reply
928
views
Answer: A: HTqPCR (plotCtOverview) problem
14.6 years ago Michael Muratet ▴ 420
0
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0
replies
1.8k
views
Comment: C: htqPCR question
14.6 years ago Michael Muratet ▴ 420
0
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1
reply
1.8k
views
Comment: C: htqPCR question
14.6 years ago Michael Muratet ▴ 420
0
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1
reply
1.8k
views
Comment: C: htqPCR question
14.6 years ago Michael Muratet ▴ 420
0
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1
reply
2.6k
views
Comment: C: Import files from Applied Biosystems 7900HT?
14.6 years ago Michael Muratet ▴ 420
0
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1
reply
2.6k
views
Comment: C: Import files from Applied Biosystems 7900HT?
14.6 years ago Michael Muratet ▴ 420
0
votes
2
replies
997
views
HTqPCR version and plotCtOverview scaling errors
HTqPCR HTqPCR
updated 14.6 years ago by ★ 2.0k • written 14.6 years ago by ▴ 420
0
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1
reply
2.6k
views
Comment: C: Import files from Applied Biosystems 7900HT?
14.6 years ago Michael Muratet ▴ 420
0
votes
0
replies
997
views
Comment: C: HTqPCR version and plotCtOverview scaling errors
14.6 years ago Michael Muratet ▴ 420
0
votes
0
replies
615
views
AnnotationDbi for organisms not on bioconductor.org
Annotation Annotation
15.5 years ago Michael Muratet ▴ 420
0
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4
replies
1.5k
views
Manual annotation of ExpressionSet object created from scratch
updated 16.1 years ago by 21k • written 16.1 years ago by ▴ 420
0
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1
reply
1.5k
views
Comment: C: Manual annotation of ExpressionSet object created from scratch
16.1 years ago Michael Muratet ▴ 420
41 results • Page 1 of 1
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