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Answer: Answer: GSVA ssGSEA vs. Broad implementation of ssGSEA
5 months ago Tyler Sagendorf ▴ 10
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Answer: Answer: Its possible to remove annotation names using anno_simple in ComplexHeatmap
5 months ago Tyler Sagendorf ▴ 10
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Comment: Comment: Heatmap from the output of GSEA clusterProfiler?
7 months ago Tyler Sagendorf ▴ 10
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869
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Comment: Comment: using limma trend workflow in CAMERA
7 months ago Tyler Sagendorf ▴ 10
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1.7k
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Comment: Comment: Heatmap from the output of GSEA clusterProfiler?
7 months ago Tyler Sagendorf ▴ 10
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750
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Comment: Comment: voom does not seem to properly correct for library size
7 months ago Tyler Sagendorf ▴ 10
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1
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769
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Comment: Comment: One-sided tests with CAMERA-PR
8 months ago Tyler Sagendorf ▴ 10
3
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One-sided tests with CAMERA-PR
CAMERA limma
updated 8 months ago by 52k • written 8 months ago by ▴ 10
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1.2k
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Comment: Comment: CAMERA + Gene Ontology Gene Sets
14 months ago Tyler Sagendorf ▴ 10
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1.2k
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CAMERA + Gene Ontology Gene Sets
GO limma CAMERA
updated 14 months ago by 52k • written 14 months ago by ▴ 10
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Comment: Comment: "Counts" in enrichGO
14 months ago Tyler Sagendorf ▴ 10
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1.1k
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Comment: Comment: Can't post a question containing code?
14 months ago Tyler Sagendorf ▴ 10
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Comment: Comment: limma + voom combine voomWithQualityWeights and duplicateCorrelation
17 months ago Tyler Sagendorf ▴ 10
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1.1k
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Comment: Comment: limma + voom combine voomWithQualityWeights and duplicateCorrelation
17 months ago Tyler Sagendorf ▴ 10
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4
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1.1k
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limma + voom combine voomWithQualityWeights and duplicateCorrelation
voom RNASeq limma
17 months ago Tyler Sagendorf ▴ 10
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3.3k
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limma-trend and voom results do not agree
limma limma-trend voom RNASeq
3.4 years ago Tyler Sagendorf ▴ 10
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Answer: Answer: limma-trend and voom results do not agree
3.4 years ago Tyler Sagendorf ▴ 10
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3.3k
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Comment: Comment: limma-trend and voom results do not agree
3.4 years ago Tyler Sagendorf ▴ 10
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0
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3.3k
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Comment: Comment: limma-trend and voom results do not agree
3.4 years ago Tyler Sagendorf ▴ 10
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