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Comment:
Comment: Convert Seurat Object to Summarised Experiment or ExpressionSet
8 months ago
Bine
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Comment:
Comment: Convert Seurat Object to Summarised Experiment or ExpressionSet
8 months ago
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Comment: Convert Seurat Object to Summarised Experiment or ExpressionSet
8 months ago
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Comment:
Comment: Convert Seurat Object to Summarised Experiment or ExpressionSet
8 months ago
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Comment:
Comment: Convert Seurat Object to Summarised Experiment or ExpressionSet
8 months ago
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Comment:
Comment: Convert Seurat Object to Summarised Experiment or ExpressionSet
8 months ago
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3.2k
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Comment:
Comment: Convert Seurat Object to Summarised Experiment or ExpressionSet
8 months ago
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3.2k
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Comment:
Comment: Convert Seurat Object to Summarised Experiment or ExpressionSet
8 months ago
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3.2k
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Comment:
Comment: Convert Seurat Object to Summarised Experiment or ExpressionSet
8 months ago
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3.2k
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Comment: Convert Seurat Object to Summarised Experiment or ExpressionSet
8 months ago
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3.2k
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Comment: Convert Seurat Object to Summarised Experiment or ExpressionSet
8 months ago
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8
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23
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3.2k
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Convert Seurat Object to Summarised Experiment or ExpressionSet
SummarizedExperiment
ExpressionSet
updated 8 months ago by
Robert Castelo
★ 3.4k • written 8 months ago by
Bine
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0
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0
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3.7k
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Comment:
Comment: JoinLayers function for Seurat Object for annotation with SingleR
13 months ago
Bine
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1
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4
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3.7k
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JoinLayers function for Seurat Object for annotation with SingleR
SingleR
SeuratscRNA
written 13 months ago by
Bine
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1
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2.8k
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Comment:
Comment: SingleR annotation of several slots/patients
13 months ago
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2.8k
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Comment:
Comment: SingleR annotation of several slots/patients
13 months ago
Bine
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2
votes
4
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2.8k
views
SingleR annotation of several slots/patients
SingleR
written 13 months ago by
Bine
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1
vote
1
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469
views
DESeqResults object -> extract statistics results with rownames (gene)
DESeq2
updated 14 months ago by
ATpoint
★ 4.6k • written 14 months ago by
Bine
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0
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1.7k
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Comment:
Comment: Subsetting Range Summarized Experiment
14 months ago
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1.7k
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Comment:
Comment: Subsetting Range Summarized Experiment
14 months ago
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1.7k
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Comment:
Comment: Subsetting Range Summarized Experiment
14 months ago
Bine
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3
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6
replies
1.7k
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Subsetting Range Summarized Experiment
SummarizedExperiment
14 months ago
Bine
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0
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1
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2.2k
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Comment:
Comment: Different results between Limma and DESEQ2 for Differential Expression Analysis
2.3 years ago
Bine
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2.2k
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Comment:
Comment: Different results between Limma and DESEQ2 for Differential Expression Analysis
2.3 years ago
Bine
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2.2k
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Comment:
Comment: Different results between Limma and DESEQ2 for Differential Expression Analysis
2.3 years ago
Bine
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3
votes
7
replies
2.2k
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Different results between Limma and DESEQ2 for Differential Expression Analysis
DESeq2
limma
updated 2.3 years ago by
swbarnes2
★ 1.4k • written 2.3 years ago by
Bine
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0
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1
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1.5k
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Comment:
Comment: DESEQ2 several samples per individual
2.3 years ago
Bine
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1
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1.5k
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Comment:
Comment: DESEQ2 several samples per individual
2.3 years ago
Bine
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3
votes
5
replies
1.5k
views
DESEQ2 several samples per individual
DESeq2
updated 2.3 years ago by
Michael Love
43k • written 2.3 years ago by
Bine
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0
votes
1
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3.4k
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Comment:
Comment: Print EnhancedVolcano Plot as jpeg or similar in R Notebook
2.6 years ago
Bine
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0
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1
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3.4k
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Comment:
Comment: Print EnhancedVolcano Plot as jpeg or similar in R Notebook
2.6 years ago
Bine
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3
votes
5
replies
3.4k
views
Print EnhancedVolcano Plot as jpeg or similar in R Notebook
EnhancedVolcano
updated 2.6 years ago by
Kevin Blighe
★ 4.0k • written 2.6 years ago by
Bine
▴ 50
1
vote
1
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757
views
Result table pvalue and adjusted p value
DESeq2
updated 2.9 years ago by
Michael Love
43k • written 2.9 years ago by
Bine
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0
votes
0
replies
1.1k
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Comment:
Comment: DESEQ2 Results log2fold and pvalue changes after removing genes
3.1 years ago
Bine
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0
votes
0
replies
1.1k
views
Comment:
Comment: DESEQ2 Results log2fold and pvalue changes after removing genes
3.1 years ago
Bine
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3
votes
4
replies
1.1k
views
DESEQ2 Results log2fold and pvalue changes after removing genes
DESeq2
3.1 years ago
Bine
▴ 50
0
votes
0
replies
940
views
Comment:
Comment: padjust after running DESEQ2
3.1 years ago
Bine
▴ 50
2
votes
2
replies
940
views
padjust after running DESEQ2
DESeq2
3.1 years ago
Bine
▴ 50
1
vote
1
reply
669
views
Multiple samples per individual
DESeq2
updated 3.2 years ago by
Michael Love
43k • written 3.2 years ago by
Bine
▴ 50
0
votes
1
reply
1.3k
views
Comment:
Comment: Remove genes in a list from cts
3.3 years ago
Bine
▴ 50
2
votes
4
replies
1.3k
views
Remove genes in a list from cts
DESeq2
updated 3.3 years ago by
swbarnes2
★ 1.4k • written 3.3 years ago by
Bine
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0
votes
1
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1.8k
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Comment:
Comment: Combining two groups in contrast deseq2
3.3 years ago
Bine
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0
votes
1
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1.8k
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Comment:
Comment: Combining two groups in contrast deseq2
3.3 years ago
Bine
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1
vote
5
replies
1.8k
views
Combining two groups in contrast deseq2
DESeq2
updated 3.3 years ago by
Michael Love
43k • written 3.3 years ago by
Bine
▴ 50
0
votes
2
replies
3.3k
views
Comment:
Comment: Combat and dds Object
3.4 years ago
Bine
▴ 50
5
votes
8
replies
3.3k
views
Combat and dds Object
DESeq2
combat
updated 23 months ago by
ATpoint
★ 4.6k • written 3.4 years ago by
Bine
▴ 50
0
votes
0
replies
1.0k
views
Comment:
Comment: Problems with pulling specific variables
3.5 years ago
Bine
▴ 50
0
votes
1
reply
1.0k
views
Comment:
Comment: Problems with pulling specific variables
3.5 years ago
Bine
▴ 50
0
votes
4
replies
1.0k
views
Problems with pulling specific variables
DESeq2
3.5 years ago
Bine
▴ 50
0
votes
0
replies
2.5k
views
Comment:
Comment: ColData use only certain variable within
3.6 years ago
Bine
▴ 50
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