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Comment:
Comment: Does MNN removes same average batch vector from all cells or each cell has it's
3.2 years ago
p.joshi
▴ 40
2
votes
2
replies
1.3k
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Does MNN removes same average batch vector from all cells or each cell has it's own correction vector?
fastmnn
batchelor
BatchEffect
3.2 years ago
p.joshi
▴ 40
2
votes
7
replies
3.3k
views
How to run runNMF in parallel?
scater
single
SingleCellExperiment
updated 3.0 years ago by
Aaron Lun
★ 28k • written 4.1 years ago by
p.joshi
▴ 40
0
votes
1
reply
3.3k
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Comment:
Comment: How to run runNMF in parallel?
4.1 years ago
p.joshi
▴ 40
0
votes
0
replies
5.8k
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Comment:
C: Removing cell cycle genes in large data set integration
4.5 years ago
p.joshi
▴ 40
0
votes
1
reply
5.8k
views
Comment:
C: Removing cell cycle genes in large data set integration
4.5 years ago
p.joshi
▴ 40
9
votes
4
replies
5.8k
views
Removing cell cycle genes in large data set integration
scran
cyclone
updated 4.5 years ago by
Aaron Lun
★ 28k • written 4.5 years ago by
p.joshi
▴ 40
0
votes
0
replies
2.9k
views
Comment:
C: ggplot2 labeling and coloring specific Data points
4.6 years ago
p.joshi
▴ 40
1
vote
0
replies
3.1k
views
Comment:
C: Optimal cluster number identification using buildSNNgraph and igraph clusters
4.6 years ago
p.joshi
▴ 40
0
votes
1
reply
3.1k
views
Comment:
C: Optimal cluster number identification using buildSNNgraph and igraph clusters
4.6 years ago
p.joshi
▴ 40
7
votes
5
replies
3.1k
views
Optimal cluster number identification using buildSNNgraph and igraph clusters
scran
gap statistics
single cell clustering
updated 4.6 years ago by
Aaron Lun
★ 28k • written 4.6 years ago by
p.joshi
▴ 40
0
votes
1
reply
6.4k
views
Comment:
C: Downsample or not to downsample?
4.6 years ago
p.joshi
▴ 40
7
votes
3
replies
6.4k
views
Downsample or not to downsample?
scrna-seq
downsampleBatches
scran
updated 4.6 years ago by
Aaron Lun
★ 28k • written 4.6 years ago by
p.joshi
▴ 40
0
votes
1
reply
1.8k
views
Comment:
C: fastMNN based correction for large multi-run experiment requires a similar popul
4.9 years ago
p.joshi
▴ 40
3
votes
3
replies
1.8k
views
fastMNN based correction for large multi-run experiment requires a similar population set in all the individual datasets?
scrna-seq
integration
batch correction
updated 4.9 years ago by
Aaron Lun
★ 28k • written 4.9 years ago by
p.joshi
▴ 40
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