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Comment: Comment: Does MNN removes same average batch vector from all cells or each cell has it's
3.5 years ago p.joshi ▴ 40
2
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2
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1.4k
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Does MNN removes same average batch vector from all cells or each cell has it's own correction vector?
fastmnn batchelor BatchEffect
3.5 years ago p.joshi ▴ 40
2
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7
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3.6k
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How to run runNMF in parallel?
scater single SingleCellExperiment
updated 3.4 years ago by ★ 28k • written 4.4 years ago by ▴ 40
0
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1
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3.6k
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Comment: Comment: How to run runNMF in parallel?
4.4 years ago p.joshi ▴ 40
0
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6.4k
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Comment: C: Removing cell cycle genes in large data set integration
4.9 years ago p.joshi ▴ 40
0
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1
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6.4k
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Comment: C: Removing cell cycle genes in large data set integration
4.9 years ago p.joshi ▴ 40
9
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4
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6.4k
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Removing cell cycle genes in large data set integration
scran cyclone
updated 4.9 years ago by ★ 28k • written 4.9 years ago by ▴ 40
0
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0
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3.4k
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Comment: C: ggplot2 labeling and coloring specific Data points
4.9 years ago p.joshi ▴ 40
1
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0
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3.9k
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Comment: C: Optimal cluster number identification using buildSNNgraph and igraph clusters
4.9 years ago p.joshi ▴ 40
0
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1
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3.9k
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Comment: C: Optimal cluster number identification using buildSNNgraph and igraph clusters
4.9 years ago p.joshi ▴ 40
7
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5
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3.9k
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Optimal cluster number identification using buildSNNgraph and igraph clusters
scran gap statistics single cell clustering
updated 4.9 years ago by ★ 28k • written 4.9 years ago by ▴ 40
0
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1
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7.4k
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Comment: C: Downsample or not to downsample?
4.9 years ago p.joshi ▴ 40
7
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3
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7.4k
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Downsample or not to downsample?
scrna-seq downsampleBatches scran
updated 4.9 years ago by ★ 28k • written 4.9 years ago by ▴ 40
0
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1
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2.0k
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Comment: C: fastMNN based correction for large multi-run experiment requires a similar popul
5.2 years ago p.joshi ▴ 40
3
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3
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2.0k
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fastMNN based correction for large multi-run experiment requires a similar population set in all the individual datasets?
scrna-seq integration batch correction
updated 5.2 years ago by ★ 28k • written 5.2 years ago by ▴ 40
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