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Comment: Comment: Does MNN removes same average batch vector from all cells or each cell has it's
2.8 years ago p.joshi ▴ 40
2
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2
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1.0k
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Does MNN removes same average batch vector from all cells or each cell has it's own correction vector?
fastmnn batchelor BatchEffect
2.8 years ago p.joshi ▴ 40
2
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7
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2.8k
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How to run runNMF in parallel?
scater single SingleCellExperiment
updated 2.6 years ago by ★ 28k • written 3.7 years ago by ▴ 40
0
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1
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2.8k
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Comment: Comment: How to run runNMF in parallel?
3.6 years ago p.joshi ▴ 40
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5.3k
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Comment: C: Removing cell cycle genes in large data set integration
4.1 years ago p.joshi ▴ 40
0
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1
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5.3k
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Comment: C: Removing cell cycle genes in large data set integration
4.1 years ago p.joshi ▴ 40
9
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4
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5.3k
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Removing cell cycle genes in large data set integration
scran cyclone
updated 4.1 years ago by ★ 28k • written 4.1 years ago by ▴ 40
0
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0
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2.4k
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Comment: C: ggplot2 labeling and coloring specific Data points
4.2 years ago p.joshi ▴ 40
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0
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2.7k
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Comment: C: Optimal cluster number identification using buildSNNgraph and igraph clusters
4.2 years ago p.joshi ▴ 40
0
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1
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2.7k
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Comment: C: Optimal cluster number identification using buildSNNgraph and igraph clusters
4.2 years ago p.joshi ▴ 40
7
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5
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2.7k
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Optimal cluster number identification using buildSNNgraph and igraph clusters
scran gap statistics single cell clustering
updated 4.2 years ago by ★ 28k • written 4.2 years ago by ▴ 40
0
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1
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5.3k
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Comment: C: Downsample or not to downsample?
4.2 years ago p.joshi ▴ 40
7
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3
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5.3k
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Downsample or not to downsample?
scrna-seq downsampleBatches scran
updated 4.2 years ago by ★ 28k • written 4.2 years ago by ▴ 40
0
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1
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1.6k
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Comment: C: fastMNN based correction for large multi-run experiment requires a similar popul
4.4 years ago p.joshi ▴ 40
3
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3
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1.6k
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fastMNN based correction for large multi-run experiment requires a similar population set in all the individual datasets?
scrna-seq integration batch correction
updated 4.5 years ago by ★ 28k • written 4.5 years ago by ▴ 40
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