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Normalizing batch effects using technical replicates for DGE analysis between two conditions from 2 different runs
limma
DESeq2
edgeR
7 hours ago
anna.cot.anna.cot
▴ 30
2
votes
2
replies
933
views
log transform or not the dependent variable/ covariates
limma
edgeR
updated 4.1 years ago by
Gordon Smyth
52k • written 4.1 years ago by
anna.cot.anna.cot
▴ 30
2
votes
2
replies
1.0k
views
Paired analysis adjusted for RIN value
limma
edgeR
updated 4.1 years ago by
Gordon Smyth
52k • written 4.1 years ago by
anna.cot.anna.cot
▴ 30
0
votes
0
replies
1.0k
views
Comment:
Comment: Paired analysis adjusted for RIN value
4.1 years ago
anna.cot.anna.cot
▴ 30
1
vote
0
replies
809
views
Comment:
C: Differential gene expression associated with change in blood parameter following
4.3 years ago • updated 4.2 years ago
anna.cot.anna.cot
▴ 30
1
vote
0
replies
549
views
Differential gene expression associated with metabolite levels following diet
edger
4.2 years ago
anna.cot.anna.cot
▴ 30
5
votes
2
replies
809
views
Differential gene expression associated with change in blood parameter following diet
edger
updated 4.3 years ago by
Gordon Smyth
52k • written 4.3 years ago by
anna.cot.anna.cot
▴ 30
0
votes
3
replies
702
views
Detection of genes associated with polymorphism
edger
4.7 years ago
anna.cot.anna.cot
▴ 30
0
votes
0
replies
702
views
Comment:
A: Detection of genes associated with polymorphism
4.7 years ago
anna.cot.anna.cot
▴ 30
0
votes
0
replies
3.7k
views
Comment:
C: Gene expression associated with continuous (quantitative) traits (Limma/edgeR/co
5.6 years ago
anna.cot.anna.cot
▴ 30
0
votes
1
reply
3.7k
views
Comment:
C: Gene expression associated with continuous (quantitative) traits (Limma/edgeR/co
5.6 years ago
anna.cot.anna.cot
▴ 30
0
votes
0
replies
3.7k
views
Comment:
C: Gene expression associated with continuous (quantitative) traits (Limma/edgeR/co
5.6 years ago
anna.cot.anna.cot
▴ 30
4
votes
5
replies
3.7k
views
Gene expression associated with continuous (quantitative) traits (Limma/edgeR/correlation)
limma
edger
updated 5.6 years ago by
Gordon Smyth
52k • written 5.6 years ago by
anna.cot.anna.cot
▴ 30
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