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Affymetrix hgu133plus2.db: How to best derive an expression value for genes that map to multiple probe ids
affydata hgu133plus2.db AffymetrixChip
updated 21 months ago by ★ 4.8k • written 21 months ago by ▴ 20
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604
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DEXSeq: mcols(dxd)$fullBetaConv either contains TRUE or NA
DEXSeq
2.6 years ago Matthias Munz ▴ 20
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0
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1.4k
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DEXseq: How to do differential exon usage of genes with overlapping exons
GenomicFeatures DEXSeq
3.7 years ago Matthias Munz ▴ 20
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0
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1.3k
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Comment: Comment: tximeta throws error when combining Salmon outputs from multiple datasets
3.8 years ago Matthias Munz ▴ 20
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1.3k
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Comment: Comment: tximeta throws error when combining Salmon outputs from multiple datasets
3.8 years ago Matthias Munz ▴ 20
3
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3
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1.3k
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tximeta throws error when combining Salmon outputs from multiple datasets
tximeta
3.8 years ago Matthias Munz ▴ 20
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0
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866
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DEXSeq: Error in perGeneQValue with a single gene
DEXSeq
3.8 years ago Matthias Munz ▴ 20
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752
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Number of prognistic genes in RnaSeqSampleSize
RnaSeqSampleSize
3.9 years ago Matthias Munz ▴ 20
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2.6k
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Comment: Comment: DEXSeq: What's the best way to map an exon counting bin, e.g. E002 to exon(s) or
4.0 years ago Matthias Munz ▴ 20
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1
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2.6k
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Comment: Comment: DEXSeq: What's the best way to map an exon counting bin, e.g. E002 to exon(s) or
4.0 years ago Matthias Munz ▴ 20
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5
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2.6k
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DEXSeq: What's the best way to map an exon counting bin, e.g. E002 to exon(s) or position in transcript(s)
DEXSeq
4.0 years ago Matthias Munz ▴ 20
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0
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2.5k
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Comment: Comment: Error in GenomicAlignments::summarizeOverlaps: attempt to select less than one e
4.1 years ago Matthias Munz ▴ 20
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1
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2.5k
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Error in GenomicAlignments::summarizeOverlaps: attempt to select less than one element in OneIndex
SummarizedExperiment GenomicAlignments
4.1 years ago Matthias Munz ▴ 20
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1
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2.3k
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Comment: Comment: DESeq2 results change dramatically after scaling + centering of numeric variable
4.2 years ago Matthias Munz ▴ 20
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4
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2.3k
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DESeq2 results change dramatically after scaling + centering of numeric variable
DESeq2
updated 4.2 years ago by ★ 4.0k • written 4.2 years ago by ▴ 20
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1
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1.2k
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Which group is meant by greater oder less in the gage results?
gage
updated 4.3 years ago by ★ 1.6k • written 4.4 years ago by ▴ 20
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2.3k
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Comment: C: DESeq2 log2FoldChange is very large and differs strongly from manually calculate
6.0 years ago Matthias Munz ▴ 20
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3
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2.3k
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DESeq2 log2FoldChange is very large and differs strongly from manually calculated.
deseq2 RNAseq
updated 6.0 years ago by 43k • written 6.0 years ago by ▴ 20
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