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767
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table (pData(eset_NONE)[,"Study"]); table(pData(eset_NONE)[,"Disease"]);
affy
insilicomerging
5.8 years ago
pratikshasharma47
• 0
0
votes
0
replies
870
views
How to color samples in boxplot based on treatment or control using covdesc file
affy
boxplot
5.8 years ago
pratikshasharma47
• 0
1
vote
1
reply
823
views
Boxplot of merged data set ,colored according to control vs treatment
boxplot
affymetrix data
diferential expression
5.8 years ago
pratikshasharma47
• 0
0
votes
1
reply
957
views
Error in intramodularConnectivity(ADJ1, colorh1) : object 'colorh1' not found
error
wgcna
affymetrix data
updated 5.8 years ago by
Peter Langfelder
★ 3.0k • written 5.8 years ago by
pratikshasharma47
• 0
0
votes
0
replies
567
views
how to construct mds plot of differentially expressed genes?
differentially expressed genes
mds plot
data visualization
5.8 years ago
pratikshasharma47
• 0
0
votes
0
replies
426
views
Co expression analysis of rice affymetrix data
coexpression analysis
microarray
5.8 years ago
pratikshasharma47
• 0
0
votes
1
reply
867
views
differential expression analysis of rice
microarray
differential expression analysis
GPL2025
affymetrix
updated 5.8 years ago by
Aaron Lun
★ 28k • written 5.8 years ago by
pratikshasharma47
• 0
0
votes
1
reply
804
views
Differentially expressed genes in rice affymetrix data and annotation
affy
microarray
differentially expresed genes
limma
annotation
updated 5.8 years ago by
James W. MacDonald
67k • written 5.8 years ago by
pratikshasharma47
• 0
0
votes
0
replies
726
views
fData slot in gene expression analysis
affy
microarray
gene expression analysis
5.8 years ago
pratikshasharma47
• 0
1
vote
1
reply
1.3k
views
Error in getBM(c("affy_rice", "ensembl_gene_id", "entrezgene", "external_gene_name"), : could not find function "featureNames"
annotation
error
biomaRT
affy
ricedataset
updated 5.8 years ago by
Mike Smith
★ 6.6k • written 5.8 years ago by
pratikshasharma47
• 0
1
vote
1
reply
485
views
differential expression analysis of merged dataset
microarray
updated 5.8 years ago by
James W. MacDonald
67k • written 5.8 years ago by
pratikshasharma47
• 0
1
vote
1
reply
836
views
Annotating rice affymetrix data from different gse through biomart
annotation
go
updated 5.8 years ago by
James W. MacDonald
67k • written 5.8 years ago by
pratikshasharma47
• 0
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