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Comment: Comment: ridgeplot doesn't work: Error in ans[ypos] <- rep(yes, length.out = len)[ypos] :
2.6 years ago Guido Hooiveld ★ 4.1k
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Comment: Comment: All genes in a set for gseGO funtion
2.6 years ago Guido Hooiveld ★ 4.1k
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5.8k
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Comment: Comment: All genes in a set for gseGO funtion
2.6 years ago Guido Hooiveld ★ 4.1k
1
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5.8k
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Comment: Comment: All genes in a set for gseGO funtion
2.6 years ago Guido Hooiveld ★ 4.1k
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5.8k
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Comment: Comment: All genes in a set for gseGO funtion
2.6 years ago Guido Hooiveld ★ 4.1k
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1.5k
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Answer: Answer: Limma adj.p.value the same for many different p.values
2.6 years ago Guido Hooiveld ★ 4.1k
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1.8k
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Comment: Comment: Non-model organism , CluserProfiler message "No gene can be mapped"
2.6 years ago Guido Hooiveld ★ 4.1k
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Comment: Comment: Non-model organism , CluserProfiler message "No gene can be mapped"
2.6 years ago Guido Hooiveld ★ 4.1k
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2.2k
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Comment: Comment: ERROR: failed to find the gene identifier attribute in the 9th column of the pro
2.6 years ago Guido Hooiveld ★ 4.1k
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Answer: Answer: ClusterProfiler DotPlot Vs Ridgeplot
2.6 years ago Guido Hooiveld ★ 4.1k
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5.4k
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Comment: Comment: NCBI Locus ID to gene ID conversion
2.7 years ago Guido Hooiveld ★ 4.1k
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Answer: Answer: Any tools to convert .gff to .gtf format
2.7 years ago Guido Hooiveld ★ 4.1k
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Answer: Answer: Data visualization
2.7 years ago Guido Hooiveld ★ 4.1k
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3.6k
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Comment: Comment: pathview says my nonmodel species is unknown: "species invalid"
2.7 years ago Guido Hooiveld ★ 4.1k
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1
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3.6k
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Comment: Comment: pathview says my nonmodel species is unknown: "species invalid"
2.7 years ago Guido Hooiveld ★ 4.1k
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3.8k
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Comment: Comment: How should I set my eps value in cluster profiler?
2.7 years ago Guido Hooiveld ★ 4.1k
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Comment: Comment: GSEA with Wikipathways not entirely reproducible
2.7 years ago Guido Hooiveld ★ 4.1k
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3.6k
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Answer: Answer: Annotation in pheatmap
2.8 years ago Guido Hooiveld ★ 4.1k
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Comment: Comment: Unable to generate a dotplot to view the enrichment analysis results (clusterPro
2.8 years ago Guido Hooiveld ★ 4.1k
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1
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5.9k
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Comment: Comment: Unable to generate a dotplot to view the enrichment analysis results (clusterPro
2.8 years ago Guido Hooiveld ★ 4.1k
0
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1
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5.6k
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Answer: Answer: What is the significance of "Zero Cross" in Ranked List Metric in Gene Set Enric
2.8 years ago Guido Hooiveld ★ 4.1k
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Answer: Answer: Using queryMany() in mygene package: Problem of querying Entrez gene IDs based o
2.8 years ago Guido Hooiveld ★ 4.1k
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1
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1.7k
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Comment: Comment: How to create an aldex.clr object from a "selex" data table
2.8 years ago Guido Hooiveld ★ 4.1k
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1.7k
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Comment: Comment: How to create an aldex.clr object from a "selex" data table
2.8 years ago Guido Hooiveld ★ 4.1k
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13k
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Answer: Answer: ENSEMBL to ENTREZ ID
2.8 years ago Guido Hooiveld ★ 4.1k
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5.2k
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Comment: Comment: Pathview unable to download pathways
2.8 years ago Guido Hooiveld ★ 4.1k
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1.1k
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Answer: Answer: Pathview error Warning: Parsing ./mmu04928.xml file failed, please check the fil
2.8 years ago Guido Hooiveld ★ 4.1k
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5.2k
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Answer: Answer: Pathview unable to download pathways
2.8 years ago • updated 2.7 years ago Guido Hooiveld ★ 4.1k
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0
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Answer: Answer: Can't load UCSC transcript IDs
2.8 years ago Guido Hooiveld ★ 4.1k
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Comment: Comment: Dotplot from enricher outputting very few genes
2.9 years ago Guido Hooiveld ★ 4.1k
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1.1k
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Comment: Comment: R Bioconductor package Affxparser keeps crashing
2.9 years ago Guido Hooiveld ★ 4.1k
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1.1k
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Comment: Comment: change a column within a DESeq results object
2.9 years ago Guido Hooiveld ★ 4.1k
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3.3k
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Comment: Comment: ENSEMBL to gene symbol
2.9 years ago Guido Hooiveld ★ 4.1k
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3.5k
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Answer: Answer: TERM2NAME for enricher if I have list of GO IDs
2.9 years ago Guido Hooiveld ★ 4.1k
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2.2k
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Comment: Comment: help please！
2.9 years ago Guido Hooiveld ★ 4.1k
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2.2k
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Answer: Answer: help please！
2.9 years ago Guido Hooiveld ★ 4.1k
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1
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5.0k
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Comment: Comment: UniprotKB AC/ID to Entrez ID Conversion
2.9 years ago Guido Hooiveld ★ 4.1k
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1
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2.6k
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Comment: Comment: Methods for removing unexpressed probes of Affymetrix Human Genome U219 Array
2.9 years ago Guido Hooiveld ★ 4.1k
2
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1
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5.0k
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Answer: Answer: UniprotKB AC/ID to Entrez ID Conversion
2.9 years ago Guido Hooiveld ★ 4.1k
2
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1
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2.6k
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Answer: Answer: Methods for removing unexpressed probes of Affymetrix Human Genome U219 Array
2.9 years ago Guido Hooiveld ★ 4.1k
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4.1k
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Comment: Comment: EnrichGO not working with db created from annotationhub
2.9 years ago Guido Hooiveld ★ 4.1k
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1
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4.1k
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Comment: Comment: EnrichGO not working with db created from annotationhub
2.9 years ago Guido Hooiveld ★ 4.1k
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1
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4.1k
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Comment: Comment: EnrichGO not working with db created from annotationhub
2.9 years ago Guido Hooiveld ★ 4.1k
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1
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4.1k
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Comment: Comment: EnrichGO not working with db created from annotationhub
2.9 years ago Guido Hooiveld ★ 4.1k
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1
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4.1k
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Comment: Comment: EnrichGO not working with db created from annotationhub
2.9 years ago Guido Hooiveld ★ 4.1k
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2
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4.1k
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Answer: Answer: EnrichGO not working with db created from annotationhub
2.9 years ago Guido Hooiveld ★ 4.1k
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1
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1.5k
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Comment: Comment: cluster profiler
3.0 years ago Guido Hooiveld ★ 4.1k
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10
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3.9k
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Comment: Comment: AnnotationForge::makeOrgPackage GO Ids mistake
3.0 years ago Guido Hooiveld ★ 4.1k
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3.2k
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Answer: Answer: enrichKEGG
3.0 years ago Guido Hooiveld ★ 4.1k
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0
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4.5k
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Comment: Comment: clusterProfiler-GO enrichment Error
3.0 years ago Guido Hooiveld ★ 4.1k
723 results • Page 4 of 15
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