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Comment: Comment: Error while installing BiocManager::install("org.Vdahliae.eg.db")
1 day ago Guido Hooiveld ★ 4.0k
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1
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105
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Comment: Comment: error running enricher from clusterprofiler
1 day ago Guido Hooiveld ★ 4.0k
0
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1
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105
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Answer: Answer: error running enricher from clusterprofiler
1 day ago Guido Hooiveld ★ 4.0k
1
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1
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73
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Answer: Answer: Erroe when using makeOrgPackageFromNCBI()
1 day ago Guido Hooiveld ★ 4.0k
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77
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Comment: Comment: Problem finding certain variables when importing a public database GSE73103
3 days ago Guido Hooiveld ★ 4.0k
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0
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101
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Answer: Answer: Gene set enrichment analysis
3 days ago Guido Hooiveld ★ 4.0k
1
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475
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Comment: Comment: Trying to use enrichGO
22 days ago Guido Hooiveld ★ 4.0k
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2
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475
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Comment: Comment: Trying to use enrichGO
23 days ago Guido Hooiveld ★ 4.0k
0
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1
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475
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Comment: Comment: Trying to use enrichGO
23 days ago Guido Hooiveld ★ 4.0k
1
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0
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131
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Answer: Answer: Cannabis OrgDb
23 days ago Guido Hooiveld ★ 4.0k
0
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1
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475
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Comment: Comment: Trying to use enrichGO
23 days ago Guido Hooiveld ★ 4.0k
0
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1
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475
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Comment: Comment: Trying to use enrichGO
23 days ago Guido Hooiveld ★ 4.0k
2
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0
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229
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Comment: Comment: Cannabis and KEGGgraph
24 days ago Guido Hooiveld ★ 4.0k
1
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209
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Answer: Answer: OrgDb for maize
28 days ago Guido Hooiveld ★ 4.0k
0
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0
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192
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Comment: Comment: compareCluster dotplot: how to modify the genesets order
4 weeks ago Guido Hooiveld ★ 4.0k
2
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1
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211
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Answer: Answer: How many of my genes from my gene list are in each KEGG pathway?
4 weeks ago Guido Hooiveld ★ 4.0k
7
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37
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5.7k
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Ensembl plants at annotationHub?
ensembl ensembldb plant arabidopsis thaliana annotationhub
updated 7 hours ago by • 0 • written 5.5 years ago by ★ 4.0k
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203
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Comment: Comment: Help with identifying genes mapped to KEGG pathway using pathview
7 weeks ago Guido Hooiveld ★ 4.0k
0
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1
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368
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Answer: Answer: The order of those tied genes will be arbitrary, which may produce unexpected re
7 weeks ago Guido Hooiveld ★ 4.0k
1
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0
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229
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Comment: Comment: Only positive enrichment score in GSEA
7 weeks ago Guido Hooiveld ★ 4.0k
0
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0
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1.6k
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Answer: Answer: enrichGOgradient color change
8 weeks ago Guido Hooiveld ★ 4.0k
0
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0
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275
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Comment: Comment: Error in enrichKEGG for a model organism
12 weeks ago Guido Hooiveld ★ 4.0k
1
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0
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963
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Comment: Comment: Error MakeOrgPackagefromNCBI
3 months ago Guido Hooiveld ★ 4.0k
0
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1
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963
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Comment: Comment: Error MakeOrgPackagefromNCBI
3 months ago Guido Hooiveld ★ 4.0k
0
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1
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350
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Answer: Answer: Problem with buildGOmap from clusterProfiler
3 months ago Guido Hooiveld ★ 4.0k
0
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1
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1.1k
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Comment: Comment: Looking for documentation about the use of "split = .sign" in enrichplot's dotpl
3 months ago Guido Hooiveld ★ 4.0k
1
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1
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1.1k
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Comment: Comment: Looking for documentation about the use of "split = .sign" in enrichplot's dotpl
3 months ago Guido Hooiveld ★ 4.0k
1
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1
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1.1k
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Comment: Comment: Looking for documentation about the use of "split = .sign" in enrichplot's dotpl
3 months ago Guido Hooiveld ★ 4.0k
1
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0
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385
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Comment: Comment: Enrichement with clusterProfiler and biomart
4 months ago Guido Hooiveld ★ 4.0k
1
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1
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632
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Comment: Comment: Access genes associated with GO terms for a topGO object created with gene2GO
4 months ago Guido Hooiveld ★ 4.0k
0
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0
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8.7k
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Comment: Comment: No gene can be mapped error with clusterprofiler
4 months ago Guido Hooiveld ★ 4.0k
0
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0
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2.2k
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Comment: Comment: clusterProfiler - custom annotations
4 months ago Guido Hooiveld ★ 4.0k
1
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0
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2.0k
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Comment: Comment: clusterProfiler for KEGG enrichment (non-model species) Over-Representation Anal
4 months ago Guido Hooiveld ★ 4.0k
0
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0
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5.0k
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Comment: Comment: GO enrichment analysis on Solanum lycopersicum proteomics dataset (UniProt IDs)
5 months ago Guido Hooiveld ★ 4.0k
0
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0
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414
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Comment: Comment: Error Oligo package asking for pd.2.0 package annotation
5 months ago Guido Hooiveld ★ 4.0k
0
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1
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414
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Answer: Answer: Error Oligo package asking for pd.2.0 package annotation
5 months ago Guido Hooiveld ★ 4.0k
0
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0
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876
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Comment: Comment: How can we use the organism database created by makeorgPackageFromNCBI to KEGG a
5 months ago Guido Hooiveld ★ 4.0k
0
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1
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876
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Comment: Comment: How can we use the organism database created by makeorgPackageFromNCBI to KEGG a
5 months ago Guido Hooiveld ★ 4.0k
0
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0
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701
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Comment: Comment: It's possible to use clusterProfiler without an annotationDBI package
5 months ago Guido Hooiveld ★ 4.0k
0
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1
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701
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Comment: Comment: It's possible to use clusterProfiler without an annotationDBI package
5 months ago Guido Hooiveld ★ 4.0k
0
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1
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701
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Comment: Comment: It's possible to use clusterProfiler without an annotationDBI package
5 months ago Guido Hooiveld ★ 4.0k
0
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2
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701
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Comment: Comment: It's possible to use clusterProfiler without an annotationDBI package
5 months ago Guido Hooiveld ★ 4.0k
0
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1
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701
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Answer: Answer: It's possible to use clusterProfiler without an annotationDBI package
5 months ago Guido Hooiveld ★ 4.0k
1
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0
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1.2k
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Comment: Comment: Annotation hub and clusterProfiler errors
6 months ago Guido Hooiveld ★ 4.0k
0
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0
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768
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Comment: Comment: Important Bioconductor Release 3.18 deadlines this week
7 months ago Guido Hooiveld ★ 4.0k
1
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1
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817
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Comment: Comment: Help with orgdb for non-model species via makeOrgPackageFromNCBI
7 months ago Guido Hooiveld ★ 4.0k
0
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0
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3.2k
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Comment: Comment: NCBI Locus ID to gene ID conversion
7 months ago Guido Hooiveld ★ 4.0k
0
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0
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1.2k
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Comment: Comment: pathview error "negative length vectors are not allowed
7 months ago Guido Hooiveld ★ 4.0k
0
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1
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1.2k
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Comment: Comment: pathview error "negative length vectors are not allowed
7 months ago Guido Hooiveld ★ 4.0k
0
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1
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755
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Comment: Comment: Why do I obtain Identical Adj.P value when running edgeR ?
8 months ago Guido Hooiveld ★ 4.0k
686 results • Page 1 of 14
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