Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
0
votes
1
reply
676
views
Comment: Comment: RNA-seq: samples form different experiments, how to do DGEs?
3 months ago Gordon Smyth 52k
1
vote
1
reply
1.2k
views
Comment: Comment: Zero intra-block correlation in RRBS analysis using voomLmFit with block
3 months ago Gordon Smyth 52k
0
votes
1
reply
676
views
Answer: Answer: RNA-seq: samples form different experiments, how to do DGEs?
3 months ago Gordon Smyth 52k
2
votes
1
reply
843
views
Answer: Answer: Analysis of 2*4 factorial design
3 months ago Gordon Smyth 52k
1
vote
1
reply
1.2k
views
Comment: Comment: Zero intra-block correlation in RRBS analysis using voomLmFit with block
3 months ago Gordon Smyth 52k
0
votes
2
replies
1.8k
views
Answer: Answer: limma technical repeat correction
3 months ago Gordon Smyth 52k
1
vote
0
replies
1.5k
views
Comment: Comment: LIMMA Differing P-Values for Treatment-Contrast Parameterization vs Group-Means
3 months ago Gordon Smyth 52k
1
vote
1
reply
1.5k
views
Comment: Comment: LIMMA Differing P-Values for Treatment-Contrast Parameterization vs Group-Means
3 months ago Gordon Smyth 52k
0
votes
0
replies
1.5k
views
Comment: Comment: LIMMA Differing P-Values for Treatment-Contrast Parameterization vs Group-Means
3 months ago Gordon Smyth 52k
2
votes
1
reply
1.5k
views
Answer: Answer: LIMMA Differing P-Values for Treatment-Contrast Parameterization vs Group-Means
3 months ago Gordon Smyth 52k
2
votes
1
reply
1.2k
views
Answer: Answer: Zero intra-block correlation in RRBS analysis using voomLmFit with block
3 months ago Gordon Smyth 52k
0
votes
0
replies
1.3k
views
Comment: Comment: Bioconductor 3.20 Release Schedule
3 months ago Gordon Smyth 52k
0
votes
1
reply
1.3k
views
Answer: Answer: Bioconductor 3.20 Release Schedule
3 months ago Gordon Smyth 52k
1
vote
0
replies
412
views
Answer: Answer: Automatically generate contrasts from a model matrix / formula
3 months ago Gordon Smyth 52k
2
votes
1
reply
362
views
Answer: Answer: How to subset voomLmFit (MArrayLM) object?
3 months ago Gordon Smyth 52k
4
votes
1
reply
389
views
Answer: Answer: edgeR 4.2.1 compression bug: a minimally reproducible snippet
3 months ago Gordon Smyth 52k
0
votes
1
reply
443
views
Answer: Answer: EdgeR - Apparent Wrong Direction of logFC with Low Count Data
4 months ago Gordon Smyth 52k
0
votes
0
replies
513
views
Comment: Comment: Question on performing ANOVA-like analysis using limma
4 months ago Gordon Smyth 52k
0
votes
0
replies
513
views
Answer: Answer: Question on performing ANOVA-like analysis using limma
4 months ago Gordon Smyth 52k
0
votes
0
replies
891
views
Comment: Comment: AffylmGUI does not start wit R 4.4.1
4 months ago Gordon Smyth 52k
0
votes
2
replies
891
views
Comment: Comment: AffylmGUI does not start wit R 4.4.1
4 months ago Gordon Smyth 52k
0
votes
0
replies
891
views
Comment: Comment: AffylmGUI does not start wit R 4.4.1
4 months ago Gordon Smyth 52k
1
vote
0
replies
506
views
Answer: Answer: Help with design matrix for RNA-seq data using edgeR
4 months ago Gordon Smyth 52k
0
votes
0
replies
912
views
Comment: Comment: Seeking Advice on Using edgeR and variancePartition for RNA-seq Data from Multip
5 months ago Gordon Smyth 52k
0
votes
0
replies
912
views
Comment: Comment: Seeking Advice on Using edgeR and variancePartition for RNA-seq Data from Multip
5 months ago Gordon Smyth 52k
1
vote
1
reply
912
views
Answer: Answer: Seeking Advice on Using edgeR and variancePartition for RNA-seq Data from Multip
5 months ago Gordon Smyth 52k
0
votes
1
reply
912
views
Comment: Comment: Seeking Advice on Using edgeR and variancePartition for RNA-seq Data from Multip
5 months ago Gordon Smyth 52k
3
votes
0
replies
588
views
Answer: Answer: voom does not seem to properly correct for library size
5 months ago Gordon Smyth 52k
1
vote
2
replies
891
views
Answer: Answer: AffylmGUI does not start wit R 4.4.1
5 months ago Gordon Smyth 52k
0
votes
0
replies
883
views
Answer: Answer: RNASeq normlization for samples with global shift in gene expression
5 months ago Gordon Smyth 52k
0
votes
0
replies
602
views
Answer: Answer: Differential expression analysis in time course experiments with DESeq2
5 months ago Gordon Smyth 52k
3
votes
1
reply
687
views
Answer: Answer: using limma trend workflow in CAMERA
5 months ago Gordon Smyth 52k
1
vote
0
replies
630
views
Comment: Comment: One-sided tests with CAMERA-PR
5 months ago Gordon Smyth 52k
2
votes
1
reply
630
views
Answer: Answer: One-sided tests with CAMERA-PR
5 months ago Gordon Smyth 52k
0
votes
0
replies
586
views
Answer: Answer: comparing common differentially expressed genes from two Rna-Seq Dataset.
5 months ago Gordon Smyth 52k
2
votes
2
replies
636
views
Answer: Answer: RUV - Does my data need further normalisation?
5 months ago Gordon Smyth 52k
0
votes
0
replies
432
views
Answer: Answer: edgeR - design a complex matrix
5 months ago Gordon Smyth 52k
1
vote
0
replies
634
views
Answer: Answer: Optimizing CPM Calculation for Varied RNA-seq Data
5 months ago Gordon Smyth 52k
0
votes
0
replies
745
views
Comment: Comment: how limma work with continous variables
6 months ago Gordon Smyth 52k
0
votes
0
replies
1.8k
views
Comment: Comment: LIMMA 2x2 Factorial Design with Paired Samples
6 months ago Gordon Smyth 52k
0
votes
1
reply
745
views
Comment: Comment: how limma work with continous variables
6 months ago Gordon Smyth 52k
1
vote
0
replies
764
views
Comment: Comment: limma and Syntactically Invalid Factor Values
6 months ago Gordon Smyth 52k
0
votes
1
reply
764
views
Comment: Comment: limma and Syntactically Invalid Factor Values
6 months ago Gordon Smyth 52k
0
votes
2
replies
1.8k
views
Comment: Comment: LIMMA 2x2 Factorial Design with Paired Samples
6 months ago Gordon Smyth 52k
2
votes
1
reply
1.8k
views
Answer: Answer: LIMMA 2x2 Factorial Design with Paired Samples
6 months ago Gordon Smyth 52k
0
votes
0
replies
375
views
Answer: Answer: featureCounts from Rsubread
6 months ago Gordon Smyth 52k
2
votes
2
replies
2.1k
views
Answer: Answer: Inconsistent nullp and goseq enrichment results across operating systems
6 months ago Gordon Smyth 52k
0
votes
0
replies
656
views
Comment: Comment: DE analysis in EdgeR /Can any one please help me.
6 months ago Gordon Smyth 52k
0
votes
2
replies
656
views
Answer: Answer: DE analysis in EdgeR /Can any one please help me.
6 months ago Gordon Smyth 52k
1
vote
1
reply
880
views
Comment: Comment: Differences in Limma and Dreamlet random effects from confounded dataset
6 months ago Gordon Smyth 52k
5,213 results • Page 2 of 105
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6