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Comment: Comment: Error while reading rsem files in tximport
2.2 years ago mohammedtoufiq91 ▴ 10
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1.7k
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Comment: Comment: Error while reading rsem files in tximport
2.2 years ago mohammedtoufiq91 ▴ 10
2
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3
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1.7k
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Error while reading rsem files in tximport
DESeq2 tximport rsem RNASeq tximportData
2.2 years ago mohammedtoufiq91 ▴ 10
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Comment: Comment: Possibility of using TPM or FPKM values in edgeR for differential expression ana
2.2 years ago mohammedtoufiq91 ▴ 10
0
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1
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4.9k
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Comment: Comment: Possibility of using TPM or FPKM values in edgeR for differential expression ana
2.2 years ago mohammedtoufiq91 ▴ 10
2
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4
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4.9k
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Possibility of using TPM or FPKM values in edgeR for differential expression analysis?
DESeq2 R edgeR Normalization RNASeq
2.2 years ago mohammedtoufiq91 ▴ 10
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1.1k
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Comment: Comment: How to process and analyze Total RNA-Seq data?
2.2 years ago mohammedtoufiq91 ▴ 10
1
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2
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1.1k
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How to process and analyze Total RNA-Seq data?
DESeq2 R edgeR Normalization RNASeq
2.2 years ago mohammedtoufiq91 ▴ 10
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2.5k
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Comment: Comment: Question on performing filtering by gene expression on a normalized matrix in li
2.4 years ago mohammedtoufiq91 ▴ 10
0
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1
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2.5k
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Comment: Comment: Question on performing filtering by gene expression on a normalized matrix in li
2.4 years ago mohammedtoufiq91 ▴ 10
5
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8
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2.5k
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Question on performing filtering by gene expression on a normalized matrix in limma?
expression R filtering limma
2.4 years ago • updated 2.2 years ago mohammedtoufiq91 ▴ 10
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2.5k
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Comment: Comment: Question on performing filtering by gene expression on a normalized matrix in li
2.4 years ago mohammedtoufiq91 ▴ 10
0
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1
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2.1k
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Comment: Comment: Question on RNA-Seq single sample data analysis in EdgeR
2.7 years ago mohammedtoufiq91 ▴ 10
3
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3
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2.1k
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Question on RNA-Seq single sample data analysis in EdgeR
R edgeR limma RNASeq Normalization
updated 2.7 years ago by 52k • written 2.7 years ago by ▴ 10
0
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1.8k
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Comment: Comment: How to best visualize multi-level transcriptomics experiment data?
2.7 years ago mohammedtoufiq91 ▴ 10
4
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6
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1.8k
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How to best visualize multi-level transcriptomics experiment data?
ggplot2 Transcriptomics Visualization R limma
2.7 years ago mohammedtoufiq91 ▴ 10
0
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0
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1.8k
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Comment: Comment: How to best visualize multi-level transcriptomics experiment data?
2.7 years ago mohammedtoufiq91 ▴ 10
0
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1
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1.8k
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Comment: Comment: How to best visualize multi-level transcriptomics experiment data?
2.7 years ago mohammedtoufiq91 ▴ 10
0
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0
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1.7k
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Comment: Comment: How to make design matrices or compare contrast in limma
2.8 years ago mohammedtoufiq91 ▴ 10
3
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4
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1.7k
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How to make design matrices or compare contrast in limma
designmatrices differentialexpression makeContrasts limma model.matrix
2.8 years ago mohammedtoufiq91 ▴ 10
0
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0
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1.7k
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Comment: Comment: How to make design matrices or compare contrast in limma
2.8 years ago mohammedtoufiq91 ▴ 10
1
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1
reply
2.9k
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Comment: Comment: Unlog transformed data in DESeq2
3.1 years ago mohammedtoufiq91 ▴ 10
4
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4
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2.9k
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Unlog transformed data in DESeq2
RNASeq DESeq2 vst rlog Normalization
updated 14 months ago by 52k • written 3.1 years ago by ▴ 10
0
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2.8k
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Comment: Comment: Errors in Processing GSE36411_non-normalized.txt file of Illumina data using lu
3.1 years ago mohammedtoufiq91 ▴ 10
0
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1
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2.8k
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Comment: Comment: Errors in Processing GSE36411_non-normalized.txt file of Illumina data using lu
3.1 years ago mohammedtoufiq91 ▴ 10
0
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1
reply
1.4k
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Re-normalize microarray dataset in R
microarray quantile expression R Normalization
updated 3.5 years ago by ▴ 80 • written 3.6 years ago by ▴ 10
0
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2
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2.1k
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How to adjust and align timepoints on x-axis in the ggplot2
ggplot2 line plot x-axis data frame R
5.2 years ago mohammedtoufiq91 ▴ 10
0
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0
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867
views
Unable to obtain the line chart with error envelop in ggplot2 and geom_ribbon()
ggplot2 line chart R geom_ribbon()
5.3 years ago mohammedtoufiq91 ▴ 10
0
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0
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3.8k
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Comment: C: Handle missing values in the z-score matrix while plotting heatmap in the Comple
5.4 years ago mohammedtoufiq91 ▴ 10
0
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1
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3.8k
views
Comment: C: Handle missing values in the z-score matrix while plotting heatmap in the Comple
5.4 years ago mohammedtoufiq91 ▴ 10
3
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7
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3.8k
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Handle missing values in the z-score matrix while plotting heatmap in the ComplexHeatmap
matrix heatmap ComplexHeatmap missing values R
updated 5.4 years ago by ▴ 290 • written 5.4 years ago by ▴ 10
0
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0
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1.9k
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Comment: C: Merging two files based on the identifier column (gene symbols)?
5.4 years ago mohammedtoufiq91 ▴ 10
1
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4
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1.9k
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Merging two files based on the identifier column (gene symbols)?
merge files R packages gene annotations
5.4 years ago mohammedtoufiq91 ▴ 10
0
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0
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1.3k
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Comment: C: Are there any functions to subtract all features(rows) to a particular value(row
5.5 years ago mohammedtoufiq91 ▴ 10
0
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1
reply
1.3k
views
Comment: C: Are there any functions to subtract all features(rows) to a particular value(row
5.5 years ago mohammedtoufiq91 ▴ 10
2
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4
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1.3k
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Are there any functions to subtract all features(rows) to a particular value(row) in the same data file?
R python normalization matrix
updated 5.5 years ago by ▴ 30 • written 5.5 years ago by ▴ 10
0
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0
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1.0k
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Comment: C: Support for import of custom matrix data in the ddCt R package
5.5 years ago mohammedtoufiq91 ▴ 10
1
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2
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1.0k
views
Support for import of custom matrix data in the ddCt R package
ddCt import analysis R qRTPCR
updated 5.5 years ago by ▴ 120 • written 5.5 years ago by ▴ 10
0
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0
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918
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Sample grouping (phenoData) and visualization in R package- HtqPCR
HtqPCR grouping visualization R phenoData
5.5 years ago mohammedtoufiq91 ▴ 10
0
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0
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1.1k
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Comment: C: Creation of qPCRset in R for HtqPCR
6.3 years ago mohammedtoufiq91 ▴ 10
0
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3
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1.1k
views
Creation of qPCRset in R for HtqPCR
R bioconductor htqpcr qpcrset object
6.3 years ago mohammedtoufiq91 ▴ 10
91 results • Page 2 of 2
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