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2.3k
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Comment: C: is there a function in edger the same as vst or rlog in deseq2
4.3 years ago Kevin Blighe ★ 4.0k
0
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1
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11k
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Comment: C: Change fontsize/remove name of annotation ComplexHeatmap package
4.3 years ago Kevin Blighe ★ 4.0k
0
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1
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3.1k
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Comment: C: plotPCA in DESeq2
4.3 years ago Kevin Blighe ★ 4.0k
0
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4
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3.1k
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Comment: A: plotPCA in DESeq2
4.3 years ago Kevin Blighe ★ 4.0k
0
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1
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3.1k
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Comment: C: plotPCA in DESeq2
4.3 years ago Kevin Blighe ★ 4.0k
0
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0
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1.0k
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Comment: C: biomart webservice error when using data from Phytozome
4.3 years ago Kevin Blighe ★ 4.0k
2
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1
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2.3k
views
Answer: A: is there a function in edger the same as vst or rlog in deseq2
4.3 years ago Kevin Blighe ★ 4.0k
0
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0
replies
841
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Comment: C: DEXSEQ error (no counts falling in this gene, there is nothing to plot).
4.3 years ago Kevin Blighe ★ 4.0k
0
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0
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11k
views
Comment: C: Change fontsize/remove name of annotation ComplexHeatmap package
4.3 years ago Kevin Blighe ★ 4.0k
0
votes
1
reply
841
views
Comment: C: DEXSEQ error (no counts falling in this gene, there is nothing to plot).
4.3 years ago Kevin Blighe ★ 4.0k
0
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1
reply
841
views
Answer: A: DEXSEQ error (no counts falling in this gene, there is nothing to plot).
4.3 years ago Kevin Blighe ★ 4.0k
0
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1
reply
1.4k
views
Comment: C: How to create a matrix from a set of files containing counts for a set of attri
4.3 years ago Kevin Blighe ★ 4.0k
0
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1
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670
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Answer: C: DEXSeq Illegal Strand Error
4.3 years ago Kevin Blighe ★ 4.0k
0
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1
reply
614
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Comment: C: DEXSEQ error (subscript out of boundsflattenedFile)
4.3 years ago Kevin Blighe ★ 4.0k
0
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0
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937
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Comment: C: Highlight uniq transcripts in Gviz
4.3 years ago Kevin Blighe ★ 4.0k
0
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1
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1.3k
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Comment: C: No enriched GO terms with 1000 more genes
4.3 years ago Kevin Blighe ★ 4.0k
0
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0
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1.3k
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Comment: C: No enriched GO terms with 1000 more genes
4.3 years ago Kevin Blighe ★ 4.0k
1
vote
1
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937
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Answer: A: Highlight uniq transcripts in Gviz
4.3 years ago Kevin Blighe ★ 4.0k
0
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0
replies
865
views
Answer: A: Differential analysis of protein spectral counts using msnSet object
4.3 years ago Kevin Blighe ★ 4.0k
1
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1
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1.3k
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Comment: C: No enriched GO terms with 1000 more genes
4.3 years ago Kevin Blighe ★ 4.0k
0
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0
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674
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Comment: C: Annotation best practices
4.3 years ago Kevin Blighe ★ 4.0k
1
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3
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1.1k
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Answer: A: scRNA-seq question, assayData() error
4.3 years ago Kevin Blighe ★ 4.0k
0
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0
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1000
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Comment: C: DEseq2 2x2 design using a grouping variable
4.3 years ago Kevin Blighe ★ 4.0k
0
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0
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2.4k
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Comment: C: Reporting S values? Reporting padj values?
4.3 years ago Kevin Blighe ★ 4.0k
0
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1
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1000
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Comment: C: DEseq2 2x2 design using a grouping variable
4.3 years ago Kevin Blighe ★ 4.0k
0
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1
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1000
views
Answer: C: DEseq2 2x2 design using a grouping variable
4.3 years ago Kevin Blighe ★ 4.0k
0
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0
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1.1k
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Answer: A: DESeq2: error message
4.3 years ago Kevin Blighe ★ 4.0k
0
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0
replies
1.4k
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Comment: C: Suggestion for next revision of edgeR User Guide re Design matrix setup
4.3 years ago Kevin Blighe ★ 4.0k
2
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1
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9.7k
views
Answer: A: Error from DegPlot $<-.data.frame`(`*tmp*`, "xs", value = integer(0)) : replacem
4.3 years ago Kevin Blighe ★ 4.0k
0
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1
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2.2k
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Comment: C: DESeq error: Error in validityMethod(object) : nrow(design) == ncol(object) is n
4.3 years ago Kevin Blighe ★ 4.0k
0
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0
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2.5k
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Comment: C: Don't let TopGo to trimm long GO names
4.3 years ago Kevin Blighe ★ 4.0k
0
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1
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2.2k
views
Answer: A: DESeq error: Error in validityMethod(object) : nrow(design) == ncol(object) is n
4.3 years ago Kevin Blighe ★ 4.0k
0
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0
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1.0k
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Comment: C: Rescaling predictors in DESeq changes outcomes?
4.3 years ago Kevin Blighe ★ 4.0k
0
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0
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885
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Comment: C: Argument map.symbol converting IDs even when its value is FALSE
4.3 years ago Kevin Blighe ★ 4.0k
2
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2
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1.9k
views
Answer: A: ggcyto wrong axis scale?
4.3 years ago Kevin Blighe ★ 4.0k
0
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0
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1.5k
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Comment: C: Error with using getBM function in biomaRt
4.4 years ago Kevin Blighe ★ 4.0k
2
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0
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518
views
Answer: A: small number of significant gene
4.4 years ago Kevin Blighe ★ 4.0k
0
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1
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3.0k
views
Answer: A: Normalisation of rlog and VSD transformation
4.4 years ago Kevin Blighe ★ 4.0k
0
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0
replies
625
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Comment: C: TFBSTools promoter analysis
4.4 years ago Kevin Blighe ★ 4.0k
0
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0
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3.7k
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Comment: C: Normalisation in DESeq2
4.4 years ago Kevin Blighe ★ 4.0k
1
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1
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3.7k
views
Comment: C: Normalisation in DESeq2
4.4 years ago Kevin Blighe ★ 4.0k
0
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2
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3.7k
views
Comment: C: Normalisation in DESeq2
4.4 years ago Kevin Blighe ★ 4.0k
1
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1
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3.7k
views
Answer: A: Normalisation in DESeq2
4.4 years ago Kevin Blighe ★ 4.0k
0
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0
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320
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Comment: C: Bogdan Popescu, PhD
4.4 years ago Kevin Blighe ★ 4.0k
0
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0
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1.9k
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Comment: C: How can I generate a heatmap and clustering of differentially expressed genes in
4.4 years ago Kevin Blighe ★ 4.0k
0
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0
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2.2k
views
Comment: C: Pairwise comparison of multiple groups with different base
4.4 years ago Kevin Blighe ★ 4.0k
0
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0
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1.9k
views
Answer: A: How can I generate a heatmap and clustering of differentially expressed genes in
4.4 years ago Kevin Blighe ★ 4.0k
1
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0
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3.0k
views
Comment: C: how to analyze WGCNA results?
4.4 years ago Kevin Blighe ★ 4.0k
0
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0
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862
views
Answer: C: Error in generating heatmap
4.4 years ago Kevin Blighe ★ 4.0k
1
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1
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3.0k
views
Comment: C: how to analyze WGCNA results?
4.4 years ago Kevin Blighe ★ 4.0k
889 results • Page 12 of 18
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