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5
votes
2
replies
26k
views
DESeq2: thousands of NA for pvalues?
deseq2
rna-seq
DEGs
cooks cutoff
updated 4 days ago by
fuqichen1
• 0 • written 6.1 years ago by
aishu.jp
▴ 30
0
votes
1
reply
1.2k
views
Comment:
C: How to get multi-factor Deseq LRT test log P values for a particular condition
4.4 years ago
aishu.jp
▴ 30
1
vote
7
replies
1.2k
views
How to get multi-factor Deseq LRT test log P values for a particular condition
Deseq2
LRT
Factors
RNAseq
4.4 years ago
aishu.jp
▴ 30
0
votes
1
reply
1.2k
views
Comment:
A: How to get multi-factor Deseq LRT test log P values for a particular condition
updated 4.4 years ago by
Kevin Blighe
★ 4.0k • written 4.4 years ago by
aishu.jp
▴ 30
0
votes
1
reply
840
views
How to describe LRT test condition for time series RNA-seq data of 2 varieties
deseq2
LRT
RNAseq
condition
updated 4.5 years ago by
Michael Love
43k • written 4.5 years ago by
aishu.jp
▴ 30
5
votes
2
replies
3.2k
views
How to perform DEseq2 on datasets without replicates or merged replicates
deseq2
R
bioconductor
RNA_Seq
replicates
updated 5.2 years ago by
swbarnes2
★ 1.4k • written 5.2 years ago by
aishu.jp
▴ 30
0
votes
0
replies
2.2k
views
Comment:
C: DESeq2 compare all_vs_all levels error
5.6 years ago
aishu.jp
▴ 30
0
votes
1
reply
2.2k
views
Comment:
C: DESeq2 compare all_vs_all levels error
5.6 years ago
aishu.jp
▴ 30
0
votes
4
replies
2.2k
views
DESeq2 compare all_vs_all levels error
deseq2
error
RNAseq
updated 5.6 years ago by
swbarnes2
★ 1.4k • written 5.6 years ago by
aishu.jp
▴ 30
0
votes
0
replies
911
views
How to manage self loop in gene coexpression network constructed using Pearson correlation in Cor() function
rna-seq
gcn
desq2
pearsoncorrelation
6.6 years ago
aishu.jp
▴ 30
0
votes
0
replies
2.2k
views
Comment:
C: DESeq LRT test and construction of Co-expression network
6.9 years ago
aishu.jp
▴ 30
0
votes
5
replies
2.2k
views
DESeq LRT test and construction of Co-expression network
LRT
co-expression network
deseq2
time course experiment
network analysis
updated 20 months ago by
Jennifer Dehner
• 0 • written 6.9 years ago by
aishu.jp
▴ 30
1
vote
3
replies
1.2k
views
DEseq2 sample imbalance
deseq
6.9 years ago
aishu.jp
▴ 30
0
votes
1
reply
1.2k
views
Comment:
C: DEseq2 sample imbalance
6.9 years ago
aishu.jp
▴ 30
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