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Comment: C: scRNA-seq : Classification of cell cycle phase
5.4 years ago heyao ▴ 30
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Test genes expressed ( not just expressed higher ) in one or two group
limma edger
updated 5.5 years ago by 51k • written 5.5 years ago by ▴ 30
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Comment: C: Is lmFit() the fastest way to fit thousands of linear model in R and use what a
5.9 years ago heyao ▴ 30
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Is lmFit() the fastest way to fit thousands of linear model in R and use what algorithm make it so fast ?
limma
updated 5.9 years ago by 67k • written 5.9 years ago by ▴ 30
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How to quantify or decide whether a covariate should be included in the linear model for differential expression analysis ?
limma edgeR deseq2
updated 5.9 years ago by 67k • written 5.9 years ago by ▴ 30
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Answer: A: How can I compare the expression of two genes within the same sample?
5.9 years ago heyao ▴ 30
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Comment: C: scran: Are the log counts expression comparable among different genes within a s
5.9 years ago heyao ▴ 30
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Comment: C: scran: Are the log counts expression comparable among different genes within a s
5.9 years ago heyao ▴ 30
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5
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scran: Are the log counts expression comparable among different genes within a sample/cell ?
scran scater
updated 5.9 years ago by ★ 28k • written 5.9 years ago by ▴ 30
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