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961
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Comment:
C: Duplication of same sample as if two different samples
6.3 years ago
A
▴ 40
0
votes
1
reply
961
views
Comment:
C: Duplication of same sample as if two different samples
6.3 years ago
A
▴ 40
0
votes
1
reply
961
views
Comment:
C: Duplication of same sample as if two different samples
6.3 years ago
A
▴ 40
0
votes
8
replies
961
views
Duplication of same sample as if two different samples
deseq2
updated 6.3 years ago by
Michael Love
43k • written 6.3 years ago by
A
▴ 40
0
votes
0
replies
1.7k
views
Comment:
C: venDiagram after limma showing more genes after specifying up or down regulated
6.5 years ago
A
▴ 40
0
votes
1
reply
1.7k
views
Comment:
C: venDiagram after limma showing more genes after specifying up or down regulated
6.5 years ago
A
▴ 40
1
vote
4
replies
1.7k
views
venDiagram after limma showing more genes after specifying up or down regulated specifically
venn diagram
venndiagram
limma
microarray
differential expression
updated 6.5 years ago by
James W. MacDonald
67k • written 6.5 years ago by
A
▴ 40
0
votes
0
replies
1.6k
views
Comment:
C: DEXSeq time course design
6.6 years ago
A
▴ 40
0
votes
1
reply
1.6k
views
Comment:
C: DEXSeq time course design
6.6 years ago
A
▴ 40
0
votes
1
reply
1.6k
views
Comment:
C: DEXSeq time course design
6.6 years ago
A
▴ 40
2
votes
5
replies
1.6k
views
DEXSeq time course design
DEXSeq
differential exon usage
updated 6.6 years ago by
Alejandro Reyes
★ 1.9k • written 6.6 years ago by
A
▴ 40
0
votes
1
reply
1.3k
views
Comment:
C: Results counts post DESeq same raw counts
6.7 years ago
A
▴ 40
1
vote
3
replies
1.3k
views
Results counts post DESeq same raw counts
DESeq2
results
updated 6.7 years ago by
Michael Love
43k • written 6.7 years ago by
A
▴ 40
0
votes
0
replies
1.1k
views
Metadata sheet for DEXSeq analysis
dexseq
differential isoform usage
isoforms
summarizeoverlaps
granges
6.8 years ago
A
▴ 40
0
votes
0
replies
1.1k
views
Comment:
C: Interpretation of results names after LRT
6.8 years ago
A
▴ 40
1
vote
2
replies
1.1k
views
Interpretation of results names after LRT
DESeq2
LRT
multiple time points
updated 6.8 years ago by
Michael Love
43k • written 6.8 years ago by
A
▴ 40
0
votes
1
reply
1.6k
views
Comment:
C: Error in DESeq "object" not found
6.9 years ago
A
▴ 40
0
votes
3
replies
1.6k
views
Error in DESeq "object" not found
deseq2
LRT
reduced model
updated 6.9 years ago by
James W. MacDonald
67k • written 6.9 years ago by
A
▴ 40
0
votes
0
replies
1.4k
views
Comment:
C: Filtering genes with a minimum number of counts between samples
6.9 years ago
A
▴ 40
0
votes
2
replies
1.4k
views
Filtering genes with a minimum number of counts between samples
DESeq2
filtering
updated 6.9 years ago by
Michael Love
43k • written 6.9 years ago by
A
▴ 40
0
votes
0
replies
1.7k
views
Comment:
C: Filtering for genes >100 counts after LRT still showing significant genes with g
6.9 years ago
A
▴ 40
0
votes
1
reply
1.7k
views
Comment:
C: Filtering for genes >100 counts after LRT still showing significant genes with g
6.9 years ago
A
▴ 40
0
votes
1
reply
1.7k
views
Comment:
C: Filtering for genes >100 counts after LRT still showing significant genes with g
6.9 years ago
A
▴ 40
3
votes
8
replies
1.7k
views
Filtering for genes >100 counts after LRT still showing significant genes with genes with 0 counts!
LRT
CPM
lowcountgenes
deseq2
6.9 years ago
A
▴ 40
0
votes
1
reply
1.7k
views
Comment:
A: Filtering for genes >100 counts after LRT still showing significant genes with g
6.9 years ago
A
▴ 40
0
votes
0
replies
3.5k
views
Comment:
C: DESeq2 nbinomLRT results interpretation
6.9 years ago
A
▴ 40
0
votes
1
reply
3.5k
views
Comment:
C: DESeq2 nbinomLRT results interpretation
6.9 years ago
A
▴ 40
0
votes
1
reply
3.5k
views
Comment:
C: DESeq2 nbinomLRT results interpretation
6.9 years ago
A
▴ 40
0
votes
1
reply
3.5k
views
Comment:
C: DESeq2 nbinomLRT results interpretation
6.9 years ago
A
▴ 40
0
votes
1
reply
3.5k
views
Comment:
C: DESeq2 nbinomLRT results interpretation
6.9 years ago
A
▴ 40
0
votes
0
replies
2.1k
views
Comment:
C: Problem converting first column to rownames
6.9 years ago
A
▴ 40
0
votes
1
reply
2.1k
views
Comment:
C: Problem converting first column to rownames
6.9 years ago
A
▴ 40
0
votes
4
replies
2.1k
views
Problem converting first column to rownames
deseq2
countdata
updated 6.9 years ago by
Michael Love
43k • written 6.9 years ago by
A
▴ 40
0
votes
0
replies
1.1k
views
Comment:
C: DESeq2, no significantly DE genes
7.0 years ago
A
▴ 40
0
votes
2
replies
1.1k
views
DESeq2, no significantly DE genes
deseq2
differential expression
adjusted pvalue
updated 7.0 years ago by
Michael Love
43k • written 7.0 years ago by
A
▴ 40
0
votes
0
replies
2.2k
views
Comment:
C: Differential expression between multiple groups
7.1 years ago
A
▴ 40
0
votes
2
replies
2.2k
views
Differential expression between multiple groups
multiple groups
differential gene expression
microarray
7.1 years ago
A
▴ 40
0
votes
0
replies
15k
views
Comment:
C: GeneList issue ClusterProfiler
7.1 years ago
A
▴ 40
0
votes
1
reply
15k
views
Comment:
C: GeneList issue ClusterProfiler
7.1 years ago
A
▴ 40
0
votes
1
reply
15k
views
Comment:
C: GeneList issue ClusterProfiler
7.1 years ago
A
▴ 40
0
votes
0
replies
1.6k
views
Comment:
C: Subsetting GSE data with information from two different slots
7.2 years ago
A
▴ 40
1
vote
2
replies
1.6k
views
Subsetting GSE data with information from two different slots
GSE
subsetting
microarray
updated 7.2 years ago by
Axel Klenk
★ 1.0k • written 7.2 years ago by
A
▴ 40
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