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0
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3.4k
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Comment:
C: limma: how to use pairing and adjust for covariates
7.6 years ago
gregory.l.stone
▴ 10
0
votes
1
reply
3.4k
views
Comment:
C: limma: how to use pairing and adjust for covariates
7.6 years ago
gregory.l.stone
▴ 10
2
votes
15
replies
3.4k
views
limma: how to use pairing and adjust for covariates
limma
limma-voom
limma paired analysis
limma contrast matrix
updated 7.6 years ago by
Aaron Lun
★ 28k • written 7.6 years ago by
gregory.l.stone
▴ 10
0
votes
1
reply
3.4k
views
Comment:
C: limma: how to use pairing and adjust for covariates
7.6 years ago
gregory.l.stone
▴ 10
0
votes
1
reply
4.1k
views
Comment:
C: remove batch effect and adjusted model for 4 covariates in Limma
7.6 years ago
gregory.l.stone
▴ 10
0
votes
1
reply
3.7k
views
Comment:
C: Multiple testing limma contrasts
7.7 years ago
gregory.l.stone
▴ 10
0
votes
1
reply
3.7k
views
Comment:
C: Multiple testing limma contrasts
7.7 years ago
gregory.l.stone
▴ 10
1
vote
6
replies
3.7k
views
Multiple testing limma contrasts
limma
limma voom
limma contrast matrix
multiple testing correction
updated 7.7 years ago by
James W. MacDonald
67k • written 7.7 years ago by
gregory.l.stone
▴ 10
0
votes
0
replies
3.7k
views
Comment:
C: Multiple testing limma contrasts
7.7 years ago
gregory.l.stone
▴ 10
0
votes
0
replies
2.1k
views
Comment:
C: limma and edgeR QL strange results
7.7 years ago
gregory.l.stone
▴ 10
0
votes
1
reply
2.1k
views
Comment:
C: limma and edgeR QL strange results
7.7 years ago
gregory.l.stone
▴ 10
0
votes
1
reply
2.1k
views
Comment:
C: limma and edgeR QL strange results
7.7 years ago
gregory.l.stone
▴ 10
0
votes
0
replies
2.1k
views
Comment:
C: limma and edgeR QL strange results
7.7 years ago
gregory.l.stone
▴ 10
0
votes
1
reply
2.1k
views
Comment:
C: limma and edgeR QL strange results
7.7 years ago
gregory.l.stone
▴ 10
0
votes
1
reply
2.1k
views
Comment:
C: limma and edgeR QL strange results
7.7 years ago
gregory.l.stone
▴ 10
0
votes
1
reply
2.1k
views
Comment:
C: limma and edgeR QL strange results
7.7 years ago
gregory.l.stone
▴ 10
4
votes
13
replies
2.1k
views
limma and edgeR QL strange results
limma
limma voom
edger
updated 7.7 years ago by
Ryan C. Thompson
★ 7.9k • written 7.7 years ago by
gregory.l.stone
▴ 10
0
votes
0
replies
1.3k
views
Comment:
C: edgeR QL with voom weights
7.7 years ago
gregory.l.stone
▴ 10
3
votes
2
replies
1.3k
views
edgeR QL with voom weights
edger
limma-voom
voom
updated 7.7 years ago by
Aaron Lun
★ 28k • written 7.7 years ago by
gregory.l.stone
▴ 10
0
votes
0
replies
2.3k
views
Comment:
C: Limma-voom contrast confusion
7.7 years ago
gregory.l.stone
▴ 10
0
votes
1
reply
2.3k
views
Comment:
C: Limma-voom contrast confusion
7.7 years ago
gregory.l.stone
▴ 10
0
votes
0
replies
2.3k
views
Comment:
C: Limma-voom contrast confusion
7.7 years ago
gregory.l.stone
▴ 10
3
votes
5
replies
2.3k
views
Limma-voom contrast confusion
limma
limma voom
limma design matrix
limma contrast matrix
limma paired analysis
updated 7.7 years ago by
Aaron Lun
★ 28k • written 7.7 years ago by
gregory.l.stone
▴ 10
0
votes
0
replies
1.9k
views
Comment:
C: limma contrast with interaction and paired samples
7.7 years ago
gregory.l.stone
▴ 10
1
vote
2
replies
1.9k
views
limma contrast with interaction and paired samples
limma
limma-voom
updated 7.7 years ago by
Aaron Lun
★ 28k • written 7.7 years ago by
gregory.l.stone
▴ 10
0
votes
1
reply
1.8k
views
Comment:
C: DESeq2 estimateDispersionGeneEst taking infinite time
7.7 years ago
gregory.l.stone
▴ 10
0
votes
0
replies
1.8k
views
Comment:
C: DESeq2 estimateDispersionGeneEst taking infinite time
7.8 years ago
gregory.l.stone
▴ 10
1
vote
5
replies
2.0k
views
Limma: paired multifactor analysis
limma
limma design matrix
limma contrast matrix
limma paired analysis
limma-voom
updated 7.8 years ago by
Gordon Smyth
51k • written 7.8 years ago by
gregory.l.stone
▴ 10
0
votes
1
reply
1.8k
views
Comment:
C: DESeq2 estimateDispersionGeneEst taking infinite time
7.8 years ago
gregory.l.stone
▴ 10
0
votes
1
reply
1.8k
views
Comment:
C: DESeq2 estimateDispersionGeneEst taking infinite time
7.8 years ago
gregory.l.stone
▴ 10
0
votes
1
reply
1.8k
views
Comment:
C: DESeq2 estimateDispersionGeneEst taking infinite time
7.8 years ago
gregory.l.stone
▴ 10
0
votes
10
replies
1.8k
views
DESeq2 estimateDispersionGeneEst taking infinite time
deseq2
paired samples
updated 7.8 years ago by
Michael Love
42k • written 7.8 years ago by
gregory.l.stone
▴ 10
0
votes
8
replies
2.0k
views
DESeq2 glibc error
deseq2
differential gene expression
model matrix
updated 7.8 years ago by
Michael Love
42k • written 7.8 years ago by
gregory.l.stone
▴ 10
0
votes
0
replies
2.0k
views
Comment:
C: DESeq2 glibc error
7.8 years ago
gregory.l.stone
▴ 10
0
votes
0
replies
2.0k
views
Comment:
C: DESeq2 glibc error
7.8 years ago
gregory.l.stone
▴ 10
0
votes
0
replies
1.4k
views
Comment:
C: DESeq2 removing columns from model matrix implication
7.8 years ago
gregory.l.stone
▴ 10
0
votes
2
replies
1.4k
views
DESeq2 removing columns from model matrix implication
deseq2
multifactorial design
paired test
updated 7.8 years ago by
Michael Love
42k • written 7.8 years ago by
gregory.l.stone
▴ 10
0
votes
0
replies
1.9k
views
Comment:
C: DESeq2 influence of 2 samples
7.8 years ago
gregory.l.stone
▴ 10
0
votes
0
replies
1.9k
views
Comment:
C: DESeq2 influence of 2 samples
7.8 years ago
gregory.l.stone
▴ 10
0
votes
2
replies
1.9k
views
Comment:
C: DESeq2 influence of 2 samples
7.8 years ago
gregory.l.stone
▴ 10
0
votes
1
reply
1.9k
views
Comment:
C: DESeq2 influence of 2 samples
7.8 years ago
gregory.l.stone
▴ 10
0
votes
9
replies
1.9k
views
DESeq2 influence of 2 samples
deseq2
outliers
differential gene expression
updated 7.8 years ago by
Michael Love
42k • written 7.8 years ago by
gregory.l.stone
▴ 10
0
votes
0
replies
1.9k
views
Comment:
C: DESeq2 influence of 2 samples
7.8 years ago
gregory.l.stone
▴ 10
0
votes
0
replies
1.3k
views
Comment:
C: DESeq2 experimental design for paired multifactor test
7.8 years ago
gregory.l.stone
▴ 10
0
votes
2
replies
1.3k
views
DESeq2 experimental design for paired multifactor test
deseq2
multiple factor design
paired samples
updated 7.8 years ago by
Michael Love
42k • written 7.8 years ago by
gregory.l.stone
▴ 10
0
votes
0
replies
4.1k
views
Comment:
C: Deciding on cooks cutoff value DESeq2
7.8 years ago
gregory.l.stone
▴ 10
0
votes
1
reply
4.1k
views
Comment:
C: Deciding on cooks cutoff value DESeq2
7.8 years ago
gregory.l.stone
▴ 10
0
votes
1
reply
5.9k
views
Comment:
C: featureCounts creating fragments and high NoFeatures value
7.8 years ago
gregory.l.stone
▴ 10
0
votes
0
replies
4.1k
views
Comment:
C: Deciding on cooks cutoff value DESeq2
7.8 years ago
gregory.l.stone
▴ 10
0
votes
2
replies
4.1k
views
Comment:
C: Deciding on cooks cutoff value DESeq2
7.8 years ago
gregory.l.stone
▴ 10
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