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windows
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2
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R/Rstudio: using rtracklayer to import bigwig files from http works with MacOS but not with Windows
import.bw
rtracklayer
Windows
http
3.0 years ago
sla
• 0
1
vote
3
replies
1.8k
views
unable to install DESeq2 there is no package called XML
deseq2
bioconductor
windows
xml
installation
updated 4.3 years ago by
Michael Love
42k • written 4.3 years ago by
sarah3
• 0
0
votes
1
reply
753
views
function plotgenomicregions does not appear in the aspli package installed in windows
software error
aspli
plotgenomicregions
windows
4.6 years ago
joanmarquez21
• 0
0
votes
5
replies
2.0k
views
rtracklayer::import() BigWig issue on windows (solved)
software error
BigWig
import
windows
4.7 years ago • updated 4.6 years ago
lsilva.m
• 0
2
votes
4
replies
4.2k
views
Error in windows() function
software error
R
windows
updated 6.1 years ago by
Mike Smith
★ 6.6k • written 6.1 years ago by
a
• 0
0
votes
5
replies
1.8k
views
HiTC importC not working
HiTC
IRanges
windows
debian
updated 6.7 years ago by
Nicolas Servant
▴ 260 • written 6.7 years ago by
René Wiegandt
• 0
0
votes
3
replies
1.2k
views
pthread problem with tokay2 window platform
pthread
windows
tokay2
updated 6.9 years ago by
Aaron Lun
★ 28k • written 6.9 years ago by
jiaxing.lin
• 0
0
votes
1
reply
1.5k
views
rhdf5 h5ls output differs from Linux to Windows
R
h5ls
windows
linux
updated 7.0 years ago by
Mike Smith
★ 6.6k • written 7.1 years ago by
maxime.fortin
• 0
0
votes
14
replies
2.6k
views
Path to file in windows
bioconductor
R
windows
diffbind
updated 7.6 years ago by
Gord Brown
▴ 670 • written 7.6 years ago by
jorrenkuster
• 0
1
vote
1
reply
1.2k
views
Building VariantAnnotation on Windows - Makevars.win error
windows
variantannotation
makevars.win
updated 8.6 years ago by
Martin Morgan
25k • written 8.6 years ago by
simon
▴ 10
0
votes
2
replies
1.6k
views
rhdf5 installation issue on Windows 64bit
rhdf5
windows
9.1 years ago
cyang227
• 0
0
votes
3
replies
2.7k
views
DLL maps not found while compiling package in Windows machine
package
compilation error
dll
windows
9.1 years ago
Miguel Juliá
• 0
8
votes
7
replies
2.0k
views
RMySQL availiability with Bioconductor 3.0
Install
RMySQL
Windows
updated 10.2 years ago by
Martin Morgan
25k • written 10.2 years ago by
Panagiotis Moulos
▴ 30
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Comment: Differene between the Wald and LRT test for time-series gene expression data
by
Denise
• 0
This makes a lot of sense, thank you very much!
Comment: Downloading Metagenomic Data with Higher Taxonomic Units
by
elozanoe
• 0
Hi! I'm facing the same problem. Is there any easy way to output relative abundances of higher taxonomic units (up to kingdom), similar to…
Comment: Is it recommended to analyze different tissues together when using edgeR
by
Gordon Smyth
51k
Just plot the samples with plotMDS(). Alternatively you would use `voomLmFit()` with `sample.weights=TRUE` or `var.group=tissue`. In princ…
Comment: Handling Epic Array Data
by
Melisa Tecik
• 0
Thanks a lot for the help. You saved my day
Answer: Differene between the Wald and LRT test for time-series gene expression data
by
James W. MacDonald
67k
The advantage to using the LRT is that it's an omnibus test that tells you if there are changes at any time point. If you have lots of time…
Votes
A: correcting the batch effects in Limma and SVA
A: Using of limma moderated t-test with "corrected" expression matrix resulting fr
A: Using of limma moderated t-test with "corrected" expression matrix resulting fr
Answer: Differene between the Wald and LRT test for time-series gene expression data
Answer: Using voom-transformed counts for unsupervised analyses (PCA, Random Forest, Ela
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