Bioconductor Varianttools

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954

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VariantTools

updated 22 months ago by Vincent J. Carey, Jr. 6.7k • written 22 months ago by Imraan • 0

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872

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protein structure determinationh varianttools

updated 7.1 years ago by Hervé Pagès 16k • written 7.1 years ago by amolares • 0

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1.9k

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varianttools gmapr

updated 8.6 years ago by Michael Lawrence ★ 11k • written 8.6 years ago by Johannes Rainer ★ 2.1k

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1.7k

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customprodb dbsnp refseq varianttools

updated 9.0 years ago by xiaojing.wang ▴ 50 • written 9.0 years ago by kristenbeck527 • 0

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9.1k

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ubuntu package installation varianttools

updated 9.1 years ago by James W. MacDonald 66k • written 9.1 years ago by lelemraposo • 0

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2.1k

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VariantTools BiocParallel GenomicAlignments VariantTools BiocParallel GenomicAlignments

updated 10.1 years ago by Martin Morgan 25k • written 10.1 years ago by Guest User ★ 13k

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2.0k

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VariantAnnotation Annotation VariantAnnotation VariantTools VariantAnnotation Annotation

updated 10.6 years ago by Valerie Obenchain ★ 6.8k • written 10.6 years ago by Thomas Girke ★ 1.7k

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1.3k

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VariantTools VariantTools

updated 10.6 years ago by Michael Lawrence ★ 11k • written 10.6 years ago by heyi xiao ▴ 360

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1.4k

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VariantTools VariantTools

updated 10.6 years ago by Michael Lawrence ★ 11k • written 10.6 years ago by heyi xiao ▴ 360

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2.2k

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IRanges GenomicRanges VariantTools XVector IRanges GenomicRanges VariantTools XVector

updated 10.6 years ago by Michael Lawrence ★ 11k • written 10.6 years ago by heyi xiao ▴ 360

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1.4k

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VariantTools VariantTools

updated 10.8 years ago by Dan Tenenbaum ★ 8.2k • written 10.9 years ago by francesca bergantino ▴ 30

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1.7k

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Coverage Cancer cycle VariantTools Coverage Cancer cycle VariantTools

updated 10.9 years ago by Taylor, Sean D ▴ 250 • written 10.9 years ago by Martin Morgan 25k

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2.2k

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VariantTools VariantTools

updated 11.0 years ago by Valerie Obenchain ★ 6.8k • written 11.0 years ago by Taylor, Sean D ▴ 250

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848

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VariantTools VariantTools

updated 11.1 years ago by Michael Lawrence ★ 11k • written 11.1 years ago by Guest User ★ 13k

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2.0k

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Coverage VariantTools ensemblVEP Coverage VariantTools ensemblVEP

updated 11.2 years ago by Valerie Obenchain ★ 6.8k • written 11.2 years ago by Guest User ★ 13k

15 results • Page 1 of 1

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Comment: Ranking the GSEA Results by Lluís Revilla Sancho ▴ 730

You can have the ranking without the cutoff. If you don't keep any gene set after the cutoff then there is nothing to rank as you said, so…

Answer: Create a Graph w/ Only the Genes Interaction by Antonio • 0

Thank you all, I solved my issue by creating a for loop. Cheers!

Comment: Ranking the GSEA Results by alserg ▴ 270

Apparently, it sends a notification to the developer on a new message after the tags were updated :) but not the change of tags itself

Comment: Ranking the GSEA Results by alserg ▴ 270

Where did you see ranking of genes by `log2FC * (-log10 p-value)`? I don't think I ever saw one and not sure what it should achieve. Aren't…

Comment: Trouble Installing DADA2 (warning: R new user) by shepherl 3.9k

As far as this ERROR for Bioc requires R version, Bioconductor is closely tied to an R release. Depending if you tried to use a premade s…

Votes

Comment: Ranking the GSEA Results

Error in `$<-.data.frame`(`*tmp*`, "dispersion", value = NA)

ChiPseeker package: plotAnnoPie identical colors for peakAnnoList features

Comment: How to get the DMR?

Answer: Using both voom and removeBatchEffect, will they double adjust the data or is it

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Popular Question to mohammedtoufiq91 ▴ 10